Published April 25, 2025
| Version v1
Dataset
Open
Haplotype-resolved genome assemblies of Cannabis sativa: Punto Rojo and Cherry Pie
Authors/Creators
-
1.
Pontificia Universidad Javeriana
- 2. Medicamentos de Cannabis SAS
-
3.
University of California, Davis
Description
These sequences are identical to GenBank JBDLLE000000000 (Punto Rojo) and JBDLLD000000000 (Cherry Pie), with the addition of organelles for Cherry Pie.
The sequences are named to comply with the PanSN-spec, i.e., PR:1:chr1 and so on. We use : in place of # to facilitate parsing the GFFs in certain software.
The three annotation sets include those transferred from cs10 with Liftoff (*-liftoff-wg), predicted resistance genes (*-nlr) and predicted terpene synthases (*-tps).
Questions are best directed towards the GitHub repository: https://github.com/COMInterop/PRCP
Files
Files
(544.1 MB)
| Name | Size | Download all |
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md5:3313e4fcada9c4df6d97189f9a325523
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195.9 MB | Download |
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md5:519b57003c875d2060ac1fa449e5a60b
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71.7 MB | Download |
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md5:1ed2cebde211f735627db7845ed952bb
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19.0 kB | Download |
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md5:3e6592a76f798dad79bf0262091584bf
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255.7 kB | Download |
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md5:88e96cc991788b075bb1b0d17c5c6b1d
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200.7 MB | Download |
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md5:bc4972b6b38209a8028925d8b16dbf72
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75.3 MB | Download |
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md5:92b21b5d65ba775e223b66972ed0df0e
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17.9 kB | Download |
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md5:c3cba2f0d22f0979456ad3eb118cec78
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284.9 kB | Download |
Additional details
Software
- Repository URL
- https://github.com/COMInterop/PRCP