Published April 22, 2025 | Version v1.2.0
Software Open

A Command Line Interface for NDPI Format Image Tile Cropping

Authors/Creators

  • 1. University of Illinois Urbana-Champaign
  • 2. University of Pennsylvania
  • 3. University of Macau

Description

We present NDPI Tile Cropper, a Command Line Interface (CLI) to read Hamamatsu NanoZoomer Digital Pathology Image (NDPI) format files and generate cropped image tiles at all available focal points. This CLI is developed based on Deep Learning and Pollen Detection in the Open World notebooks (https://github.com/fengzard/open_world_pollen_detection) authored by Jennifer T. Feng, Shu Kong, Timme H. Donders, and Surangi W. Punyasena.

Notes

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Files

paleopollen/ndpi-tile-cropper-cli-v1.2.0.zip

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Additional details

Related works

Is supplement to
Software: https://github.com/paleopollen/ndpi-tile-cropper-cli/tree/v1.2.0 (URL)

Software

Repository URL
https://github.com/paleopollen/ndpi-tile-cropper-cli