Published April 22, 2025 | Version v1.2
Software Open

WayScience/cellpainting_predicts_cardiac_fibrosis: Circulation publication ready

  • 1. University of Colorado Anschutz Medical Campus
  • 2. University of Colorado Anschutz

Description

Circulation publication ready

This release is for publishing the Circulation paper and all associated changes.

What's Changed

  • Update DOI by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/51
  • Refactor ML module by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/52
  • Create new panel J with PR curves from new models by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/54
  • update UMAPs by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/55
  • Add AUC ROC bootstrapping QC comparison by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/56
  • Update Panel J by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/57
  • Update panel E figure by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/58
  • Update training bug in evaluate models by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/59
  • Refactor umap module by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/60
  • Add healthy TGFRi to plot by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/61
  • Update UMAP to avoid cutoffs by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/62
  • Migrating to Attribution-NonCommercial 4.0 International by @gwaybio in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/64
  • Updates to code and docs by @jenna-tomkinson in https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/pull/65

Full Changelog: https://github.com/WayScience/cellpainting_predicts_cardiac_fibrosis/compare/v1.1...v1.2

Files

WayScience/cellpainting_predicts_cardiac_fibrosis-v1.2.zip

Files (113.2 MB)

Additional details