SPAAM-community/AncientMetagenomeDir: v25.03: Historic Centre of Cordoba

Release v25.03.0 includes 8 new publications, representing 132 new ancient host-associated metagenome samples, 33 new ancient microbial genomes, and 0 new ancient environmental samples. This brings the repository to a total of 206 publications, 1,672 ancient host-associated metagenome samples, 768 ancient microbial genomes, and 713 ancient environmental samples

Furthermore, this release adds 134 new ancient host-associated metagenome libraries, 296 new ancient microbial genome libraries, and 0 new ancient environmental libraries. This brings the repository to a total of 2,804 ancient host-associated metagenome libraries, 3,456 ancient microbial genomes libraries, and 822 ancient environmental libraries.

Added

Ancient Metagenome: Host Associated

• Fleskes 2024 10.1038/s42003-024-06893-0 (added by @anastbr and @rozwalak)
• Velsko 2024 10.1038/s41467-024-53920-z (added by @ivelsko and @alexhbnr)

Ancient Single Genome: Host Associated

• Patrono 2022 10.1038/s41467-022-29614-9 (added by @KaHea-21)

• Pla-Diaz 2025 10.1186/s12915-024-02108-4 (added by @jfy133)

• Valeur Seersholm 2024 10.1038/s41586-024-07651-2(added by @YuejiaoHuang and @alexhbnr)

• RodriguezVarela 2024 10.1126/sciadv.adp8625 (added by @ZoePochon)

• LlanosLizcano2025 10.1038/s41598-024-85038-z (added by @pswali and @tonidedios94)

• Barquera 2024 10.1038/s41586-024-08515-5 (added by @jasmezz)

• C14 Susat 2021 10.1016/j.celrep.2021.109278 (added by @aidaanva)

• C14 Austin 2022 10.1038/s42003-022-03890-z (added by @nihandilsad)

• C14 Warinner2014 10.1038/ng.2906 (added by @biancamariabonucci)

• C14 Key2020 10.1038/s41559-020-1106-9 (added by @iseultj)

• C14 deBarrosDamgaard2018 10.1038/s41586-018-0094-2 (added by @marcel-keller)

• C14 Susat 2024 10.1038/s42003-024-06676-7 (added by @aidaanva)

• C14 Schuenemann2013 10.1126/science.1238286 (added by @jodie-lb)

• C14 Yu2020 10.1016/j.cell.2020.04.037 (added by @hsf378)

• C14 Devault2017 10.7554/eLife.20983 (@jodie-lb)

• C14 Dux2020 10.1126/science.aba9411 (added by @aidaanva and @KaHea-21)

• C14 Sabin 2020 10.1186/s13059-020-02112-1 (added by @KaHea-21)

• C14 Lebrasseur 2024 10.1093/ve/vead087 (added by @nihandilsad)

• C14 Parker2023 10.1371/journal.ppat.1011404 (added by @iseultj)

• C14 Neumann2022 10.1016/j.cub.2022.06.094 (added by @iseultj)

• C14 Kay 2014 10.1128/mBio.01337-14 (added by @KaHea-21)

• C14 AndradesValtuena2022 10.1073/pnas.2116722119 (added by @iseultj)

• C14 Majander2024 10.1038/s41586-023-06965-x (added by @nihandilsad and @KaHea-21)

• C14 Vagene2022 10.1038/s41467-022-28562-8 (added by @iseultj)

• C14 Bos2016 10.7554/eLife.12994 (added by @marcel-keller)

• C14 Giffin 2020 10.1038/s41598-020-66012-x (added by @jodie-lb)

• C14 PattersonRoss2018 10.1371/journal.ppat.1006750 (added by @KaHea-21)

• C14 Vagene2018 0.1038/s41559-017-0446-6 (added by @marcel-keller)

• C14 Guellil2022 10.1186/s13059-021-02580-z (added by @ZoePochon)

• C14 Majander 2020 10.1016/j.cub.2020.07.058 (added by @KaHea-21)

• C14 Duggan2016 10.1016/j.cub.2016.10.061 (added by @KaHea-21)

• C14 Jackson2024 10.1093/molbev/msae017 (added by @iseultj)

• C14 Guellil2020 10.1073/pnas.2009677117 (added by @bbartholdy)

• C14 White2021 10.3390/biology10121324 (added by @biancamariabonucci)

• C14 Schuenemann2018 10.1371/journal.ppat.1006997 (added by @KaHea-21)

• C14 Muhlemann 2018 10.1038/s41586-018-0097-z (added by @KaHea-21)

• C14 Kocher2021 10.1126/science.abi5658 (added by @arthurKocher)

• C14 Guellil2018 10.1073/pnas.1807266115 (added by @KaHea-21)

• C14 Bos2011 10.1038/nature10549 (added by @KaHea-21)

• C14 Zhou2018 10.1016/j.cub.2018.05.058 (Added by @KaHea-21)

• C14 Kay2015 10.1038/ncomms7717 (Added by @KaHea-21)

• C14 Bos 2014 10.1038/nature13591 (added by @yaxalponce and @KaHea-21)

• C14 Rasmussen 2015 10.1016/j.cell.2015.10.009 (added by @mlo89)

• C14 Barquera 2020 10.1016/j.cub.2020.04.002 (added by @KaHea-21)

• C14 KrauseKyora2018 10.7554/eLife.36666 (added by @KaHea-21)

• C14 Long2022 10.1038/s42003-022-03527-1 (added by @mlo89)

• C14 Devault2014 10.1056/NEJMoa1308663 (Added by @KaHea-21)

• C14 Maixner2016 10.1126/science.aad2545 (added by @aidaanva)

• C14 Keller2019 10.1073/pnas.1820447116 (added by @marcel-keller)

• C14 Maixner2016 10.1126/science.aad2545 (added by @aidaanva)

• C14 Feldman2016 10.1093/molbev/msw170 (added by @aidaanva)

• C14 Philips2020 10.1186/s12864-020-06810-9 (added by @yaxalponce and @KaHea-21)

• C14 Rascovan2019 10.1016/j.cell.2018.11.005 (added by @aidaanva)

• C14 vanDorp2020 10.1093/molbev/msz264 (added by @aidaanva)

• C14 DeDios2019 10.1099/mgen.0.000289 (added by @aidaanva)

• C14 Kerudin2019 10.1016/j.jas.2019.105035 (added by @aidaanva)

• C14 Worobey2016 10.1038/nature19827 (added by @aidaanva)

• C14 Schuenemann2011 10.1073/pnas.1105107108 (added by @aidaanva)

• C14 Duggan2020 10.1186/s13059-020-02079-z (added by @aidaanva)

• C14 Spyrou2016 10.1016/j.chom.2016.05.012 (added by @aidaanva)

Ancient Metagenome: Environmental

Changed

Removed

Historic Centre of Cordoba

Cordoba's period of greatest glory began in the 8th century after the Moorish conquest, when some 300 mosques and innumerable palaces and public buildings were built to rival the splendours of Constantinople, Damascus and Baghdad. In the 13th century, under Ferdinand III, the Saint, Cordoba's Great Mosque was turned into a cathedral and new defensive structures, particularly the Alcázar de los Reyes Cristianos and the Torre Fortaleza de la Calahorra, were erected.