Published April 4, 2025 | Version 1.0.0

Rare disease, cell type, and phenotype association database for the Rare Disease Portal website

  • 1. ROR icon Imperial College London
  • 2. ROR icon UK Dementia Research Institute
  • 1. ROR icon UK Dementia Research Institute
  • 2. ROR icon Imperial College London

Description

MongoDB collection files for database used to serve the Rare Disease Portal.

For more details, visit the Rare Disease Portal Website repo

Setup Instructions

The following instructions are performed using the MongoDB Compass, the official GUI utlity to manage MongoDB databases.

  1. Launch Mongo Compass
  2. Connect to your database host running MongoDB service.
  3. Create a new database with the name "RareDiseaseData".
  4. Create new collections with names idential to the filenames.
  5. Use the ADD DATA button to upload the corresponding JSON files.

You can then setup the backend to point to your database host.

Files

RareDiseaseData.celltype_gene_DescartesHuman.json

Files (2.0 GB)

Name Size
md5:acc54a13688375233c2e44d74750c5c8
462.7 MB Preview Download
md5:fdcc459db2118d96101d04e5f787bb52
547.6 MB Preview Download
md5:833151d01ea9d183a9d39b832359297e
380.0 MB Preview Download
md5:d3822a80873d46e99838c9939e9f545d
619.7 MB Preview Download
md5:eaa6788b6f1f5f6b1de5d2010d2bb213
23.7 MB Preview Download
md5:d131d7c3e4f9712b9c24122ff40b0733
2.9 MB Preview Download

Additional details

Software

Repository URL
https://github.com/neurogenomics/Rare-Disease-Web-Portal
Programming language
JavaScript , Python , HTML , CSS
Development Status
Active