Published February 8, 2021
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Table 1 in Cryptic diversity found in Didymellaceae from Australian native legumes
Authors/Creators
- 1. School of Agriculture, Food and Wine, Waite Research Institute, The University of Adelaide, SA 5005, Australia
- 2. Australian Institute of Botanical Science, Royal Botanic Gardens and Domain Trust, Mrs Macquaries Rd, Sydney, NSW 2000, Australia
- 3. Department of Agriculture and Fisheries, Ecosciences Precinct, Dutton Park, QLD 4102, Australia & Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD 4350, Australia
Description
Table 1. Didymellaceae isolates examined in this study. Novel taxa and newly generated sequences are indicated in bold.
| Species | Strain 1 | Host | Locality 2 | GenBank accessions 3 | |
|---|---|---|---|---|---|
| ITS | rpb 2 | ||||
| Ascochyta astragalina | CBS 113797 | Lathyrus vernus | Sweden | KT389482 | MT018257 |
| Ascochyta benningiorum | CBS 144957 T | Soil | The Netherlands | MN823581 | MN824606 |
| Ascochyta coronillae-emeri | MFLUCC 13-0820 T | Hippocrepis emerus | Italy | MH069661 | MH069679 |
| Ascochyta fabae | CBS 524.77 | Phaseolus vulgaris | Belgium | GU237880 | MT018241 |
| Ascochyta herbicola | CBS 629.97 | Water | USA, Montana, Missoula | GU237898 | KP330421 |
| Ascochyta koolunga | DAR 78535 T | Pisum sativum | Australia, SA, Minnipa | EU338416 | EU874849 |
| BRIP 70265 | Pisum sativum | Australia, SA, Riverton | MN567671 | MN604922 | |
| BRIP 69590 | Pisum sativum | Australia, SA, Mundulla | MN567672 | MN604923 | |
| Ascochyta lentis | CBS 370.84 | Lens culinaris | Unknown | KT389474 | MT018246 |
| Ascochyta medicaginicola | CBS 112.53 T | Medicago sativa | USA | GU237749 | MT018251 |
| Ascochyta nigripycnidia | CBS 116.96 T | Vicia cracca | Russia | GU237756 | MT018253 |
| Ascochyta phacae | CBS 184.55 T | Phaca alpine | Switzerland | KT389475 | MT018255 |
| Ascochyta pilosella | CBS 583.97 T | Clintonia uniflora | Canada | MN973590 | MT018258 |
| Ascochyta pisi | CBS 122785 | Pisum sativum | The Netherlands | GU237763 | MT018244 |
| Ascochyta rabiei | CBS 237.37 T | Cicer arietinum | Bulgaria | KT389479 | MT018256 |
| Ascochyta rosae | MFLUCC 15-0063 T | Rubus ulmifolius | Italy | KY496751 | KY514409 |
| Ascochyta syringae | CBS 545.72 T | Syringa vulgaris | The Netherlands | KT389483 | MT018245 |
| Ascochyta versabilis | CBS 876.97 | Silene sp. | The Netherlands, Wageningen | GU237909 | KT389561 |
| Ascochyta viciae | CBS 451.68 | Vicia sepium | The Netherlands, Baarn, Praamgracht | KT389484 | KT389562 |
| Ascochyta viciae-pannonicae | CBS 254.92 | Vicia pannonica | Czechoslovakia | KT389485 | MT018250 |
| Ascochyta viciae-villosae | CBS 255.92 | Vicia villosa | Czechoslovakia | MN973584 | MT018249 |
| Didymella americana | CBS 185.85 | Zea mays | USA, Georgia | FJ426972 | KT389594 |
| Didymella anserina | CBS 253.80 | Germany | KT389498 | KT389595 | |
| Didymella arachidicola | CBS 333.75 T | Arachis hypogaea | South Africa, Cape Province | GU237833 | KT389598 |
| Didymella aurea | CBS 269.93 T | Medicago polymorpha | New Zealand, Auckland | GU237818 | KT389599 |
| Didymella chlamydospora | YW23-14 T | Soil | South Korea | MK836111 | LC480708 |
| Didymella coffeae-arabicae | CBS 123380 T | Coffea Arabica | Ethiopia | FJ426993 | KT389603 |
| Didymella combreti | CBS 137982 T | Combretum mossambiciensis | Zambia | MN973525 | MT018139 |
| Didymella curtisii | CBS 251.92 | Nerine sp. | The Netherlands | FJ427038 | MT018131 |
| Didymella degraaffiae | CBS 144956 T | Soil | The Netherlands | MN823444 | MN824470 |
| Didymella eucalyptica | CBS 377.91 | Eucalyptus sp. | Australia, WA | GU237846 | KT389605 |
| Didymella gardeniae | CBS 626.68 T | Gardenia jasminoides | India | FJ427003 | KT389606 |
| Didymella glomerata | CBS 528.66 | Chrysanthemum sp. | The Netherlands | FJ427013 | GU371781 |
| Didymella guttulata | CBS 127976 T | Soil | Zimbabwe | MN973524 | MT018138 |
| Didymella heteroderae | CBS 109.92 T | Undefined food material | The Netherlands | FJ426983 | KT389601 |
| Didymella keratinophila | UTHSC DI16-200 T | Homo sapiens | USA | LT592901 | LT593039 |
| Didymella lethalis | CBS 103.25 | GU237729 | KT389607 | ||
| BRIP 69584 | Lathyrus tingitanus | Australia, SA, Brownhill Creek | MN567674 | MN604925 | |
| Didymella magnoliae | MFLUCC 18-1560 T | Magnolia grandiflora | China | MK347814 | MK434852 |
| Didymella maydis | CBS 588.96 T | Zea mays | USA, Wisconsin, Hancock | FJ427086 | GU371782 |
| Didymella mitis | CBS 443.72 T | Soil | South Africa | MN973523 | MT018137 |
| Didymella musae | CBS 463.69 | Mangifera indica | India | FJ427026 | MT018148 |
| Didymella nigricans | CBS 444.81 | Acer palmatum | Japan | KY742075 | KY742158 |
| Didymella pinodella | CBS 318.90 | Pisum sativum | The Netherlands | FJ427051 | MN983533 |
| BRIP 69589 | Pisum sativum | Australia, VIC, Rainbow | MN567675 | MN604926 | |
| Didymella pinodes | CBS 525.77 T | Pisum sativum | Belgium | GU237883 | KT389614 |
| BRIP 69581 | Senna artemisioides | Australia, SA, Blanchetown | MN567676 | MN604927 | |
| BRIP 69593 | Senna artemisioides | Australia, SA, Blyth | MN567677 | MN604928 | |
| BRIP 69596 | Senna artemisioides | Australia, SA, Wudinna | MN567678 | MN604929 | |
| BRIP 69578 | Vicia cracca | Australia, NSW, Cowra | MN567679 | MN604930 | |
| Didymella pomorum | CBS 539.66 | Polygonum tataricum | The Netherlands | FJ427056 | KT389618 |
| Didymella prolaticolla | CBS 126182 T | Soil | Namibia | MN973533 | MT018157 |
| Didymella prosopidis | CBS 136414 T | Prosopis sp. | South Africa | KF777180 | MT018149 |
| BRIP 69579 | Gastrolobium celsianum | Australia, SA, Adelaide | MN5676780 | MN604931 | |
| Didymella protuberans | CBS 381.96 T | Lycium halifolium | The Netherlands | GU237853 | KT389620 |
| Didymella sancta | CBS 281.83 T | Ailanthus altissima | South Africa | FJ427063 | KT389623 |
| Didymella sinensis | CGMCC 3.18348 T | Cerasus pseudocerasus | China | KY742085 | MT018127 |
| Didymella subglobispora | CBS 364.91 T | Ananas sativus | MN973531 | MT018153 | |
| Didymella subglomerata | CBS 110.92 | Triticum sp. | USA, North Dakota | FJ427080 | KT389626 |
| Epicoccum brahmansense | CBS 990.95 T | Soil | Papua New Guinea | MN973513 | MT018119 |
| Epicoccum brasiliense | CBS 120105 T | Amaranthus sp. | Brazil | GU237760 | KT389627 |
| Epicoccum camelliae | CGMCC 3.18343 T | Camellia sinensis | China | KY742091 | KY742170 |
| Epicoccum catenisporum | CBS 181.80 T | Oryza sativa | Guinea-Bissau | FJ427069 | LT623253 |
| Epicoccum dendrobii | CGMCC 3.18359 T | Dendrobium fimbriatum | China | KY742093 | MT018084 |
| Epicoccum dickmanii | CBS 124671 T | Acropora Formosa | Australia | MN973509 | MT018113 |
| Epicoccum djirangnandiri sp. nov. | BRIP 69585 T | Swainsona galegifolia | Australia, NSW, Mount Annan | MN567673 | MN604924 |
| Epicoccum draconis | CBS 186.83 | Dracaena sp. | Rwanda | GU237795 | KT389628 |
| Epicoccum duchesneae | CGMCC 3.18345 T | Duchesnea indica | China | KY742095 | MT018115 |
| Epicoccum henningsii | CBS 104.80 | Acacia mearnsii | Kenya | GU237731 | KT389629 |
| Epicoccum hordei | CGMCC 3.18360 T | Hordeum vulgare | Australia | KY742097 | MT018102 |
| Epicoccum huancayense | CBS 105.80 T | Solanum sp. | Peru | GU237732 | KT389630 |
| Epicoccum italicum | CGMCC 3.18361 T | Acca sellowiana | Italy | KY742099 | KY742172 |
| Epicoccum keratinophilum | UTHSC DI16-271 T | Homo sapiens | USA | LT592930 | LT593068 |
| Epicoccum latusicollum | CGMCC 3.18346 T | Sorghum bicolor | China | KY742101 | KY742174 |
| Epicoccum longiostiolatum | CBS 886.95 T | Stellaria sp. | Papua New Guinea | FJ427074 | MT018108 |
| Epicoccum mackenziei | MFLUCC 16-0335 T | Ononis spinose | Italy | KX698039 | KX698035 |
| Epicoccum mezzettii | CBS 173.38 T | Populus pulp | Italy | MN973496 | MT018095 |
| Epicoccum nigrum | CBS 173.73 T | Dactylis glomerata | USA | FJ426996 | KT389632 |
| Epicoccum ovisporum | CBS 180.80 T | Zea mays | South Africa | FJ427068 | LT623252 |
| Epicoccum phragmospora | CGMCC 3.19339 T | Saccharum officinarum | China | MN215619 | MN255460 |
| Epicoccum pimprinum | CBS 246.60 T | Soil | India | FJ427049 | MT018100 |
| Epicoccum plurivorum | CBS 558.81 T | Setaria sp. | New Zealand | GU237888 | KT389634 |
| Epicoccum pneumoniae | UTHSC DI16-257 T | Homo sapiens | USA | LT592927 | LT593065 |
| Epicoccum poaceicola | MFLUCC 15-0448 T | Poaceae | Thailand | KX965727 | KX898365 |
| Epicoccum poae | CGMCC 3.18363 T | Poa annua | USA | KY742113 | KY742182 |
| Epicoccum polychromum | CBS 141502 T | Paspalum dilinateum | France | MN973506 | MT018109 |
| Epicoccum proteae | CBS 114179 T | Protea compacta x Protea neriifolia | South Africa, Somerset West | JQ044433 | LT623251 |
| Epicoccum pseudokeratinophilum | MFLUCC 18-1593 T | Prunus avium | China | MH827002 | MH853659 |
| Epicoccum purpurascens | CBS 128906 | Soil | USA | MN973488 | MT018083 |
| Epicoccum sorghinum | CBS 179.80 | Sorghum bicolor | Puerto Rico | FJ427067 | KT389635 |
| Epicoccum tobaicum | CBS 384.36 T | Soil | Indonesia | MN973493 | MT018092 |
| Epicoccum variabile | CBS 119733 T | Coffea Arabica | Brazil | MN973501 | MT018103 |
| Epicoccum viticis | CGMCC 3.18344 T | Vitex negundo | China | KY742118 | KY742186 |
| Neoascochyta desmazieri (outgroup) | CBS 297.69 T | Lolium perenne | Germany, Hohenlieth | KT389508 | KT389644 |
| Neodidymelliopsis achlydis | CBS 256.77 T | Achlys triphylla | Canada, British Columbia, Vancouver Island | KT389531 | MT018293 |
| Neodidymelliopsis cannabis | CBS 234.37 | Cannabis sativa | Unknown | GU237804 | KP330403 |
| Neodidymelliopsis farokhinejadii | CBS 142853 | Conocarpus erectus | Iran | KY449009 | KY464922 |
| Neodidymelliopsis longicolla | CBS 382.96 T | Soil | Israel, En Avdat, Negev desert | KT389532 | MT018298 |
| Neodidymelliopsis moricola | MFLUCC 17-1063 | Morus alba | Russia | KY684939 | KY684943 |
| Neodidymelliopsis negundinis | JZB380011 | Acer negundo | Russia | MG564165 | MG564166 |
| Neodidymelliopsis polemonii | CBS 109181 T | Polemonium caeruleum | The Netherlands | GU237746 | KP330427 |
| Neodidymelliopsis ranunculi | CBS 286.72 | Citrus limonium | Italy | MN973612 | MT018294 |
| Neodidymelliopsis tillae | CBS 519.95 T | Tilia sp. | Italy | MN973610 | MT018287 |
| Neodidymelliopsis tinkyukuku sp. nov. | BRIP 69592 T | Hardenbergia violacea | Australia, SA, Clare | MN5676781 | MN604932 |
| Neodidymelliopsis xanthina | CBS 383.68 T | Delphinium sp. | The Netherlands, Baarn | GU237855 | KP330431 |
| Nothophoma acaciae | CBS 143404 T | Acacia melanoxylon | Australia | MG386056 | MG386144 |
| Nothophoma anigozanthi | CBS 381.91 T | Anigozanthus maugleisii | The Netherlands | GU237852 | KT389655 |
| Nothophoma arachidis-hypogaeae | CBS 125.93 | Arachis hypogaea | India, Madras | GU237771 | KT389656 |
| Nothophoma brennandiae | CBS 145912 T | Soil | The Netherlands | MN823579 | MN824604 |
| Nothophoma garlbiwalawarda sp. nov. | BRIP 69580 | Senna artemisioides | Australia, SA, Adelaide | MN5676782 | MN604933 |
| BRIP 69586 | Senna artemisioides | Australia, SA, Berri | MN5676783 | MN604934 | |
| Nothophoma garlbiwalawarda sp. nov. | BRIP 69587 | Senna artemisioides | Australia, SA, Berri | MN5676784 | MN604935 |
| BRIP 69594 | Senna artemisioides | Australia, SA, Kimba | MN5676785 | MN604936 | |
| BRIP 69595 T | Senna artemisioides | Australia, SA, Wudinna | MN5676786 | MN604937 | |
| Nothophoma eucalyptigena | CBS 142535 T | Eucalyptus sp. | Australia | KY979771 | KY979852 |
| Nothophoma gossypiicola | CBS 377.67 | Gossypium sp. | USA, Texas | GU237845 | KT389658 |
| Nothophoma infossa | CBS 123395 T | Fraxinus pennsylvanica | Argentina, Buenos Aires Province, La Plata | FJ427025 | KT389659 |
| Nothophoma infuscata | CBS 121931 T | Acacia longifolia | New Zealand | MN973559 | MN973559 |
| Nothophoma macrospora | UTHSC DI16-199 T | Homo sapiens | USA, Arizona | LN880536 | LT593073 |
| Nothophoma naiawu sp. nov. | BRIP 69583 T | Senna artemisioides | Australia, SA, Blanchetown | MN5676787 | MN604938 |
| BRIP 69582 T | Senna artemisioides | Australia, SA, Blanchetown | MN5676788 | MN604939 | |
| Nothophoma nullicana | CPC 32330 T | Acacia falciformis | Australia | NR_156665 | MG386143 |
| Nothophoma pruni | MFLUCC 18-1600 | Prunus avium | China | MH827005 | MH853662 |
| Nothophoma quercina | CBS 633.92 | Microsphaera alphitoides from Quercus sp. | Ukraine | GU237900 | KT389657 |
| Nothophoma variabilis | UTHSC DI16-285 T | Homo sapiens | USA | LT592939 | LT593078 |
1 BRIP, Queensland Plant Pathology Herbarium, Brisbane, QLD, Australia; CBS, Westerdijk Fungal Biodiversity Institute, Utrecht, the Netherlands; CGMCC, China General Microbiological Culture Collection, Beijing, China; MFLUCC, Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; UTHSC, Fungus Testing Laboratory at the University of Texas Health Science Center, San Antonio, Texas, USA. 2 NSW, New South Wales; SA, South Australia; VIC, Victoria; WA, Western Australia. 3ITS, internal transcribed spacer region; rpb 2, RNA polymerase II second subunit. T ex-type strain.
Notes
Published as part of Keirnan, Elizabeth C., Tan, Yu Pei, Laurence, Matthew H., Mertin, Allison A., Liew, Edward C. Y., Summerell, Brett A. & Shivas, Roger G., 2021, Cryptic diversity found in Didymellaceae from Australian native legumes, pp. 1 in MycoKeys 78 on page 1, DOI: 10.3897/mycokeys.78.60063
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- Journal article: 10.3897/mycokeys.78.60063 (DOI)
- Journal article: urn:lsid:plazi.org:pub:F83FEF511ABC587BBDC4A784A3A099D2 (LSID)
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- Journal article: 10.3897/mycokeys.78.60063 (DOI)