Published March 31, 2025 | Version v1
Dataset Open

Supplementary data and scripts for "Reconstruction of human metabolic models with large language models"

Authors/Creators

  • 1. Institute of Biopharmaceutical and Health Engineering, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen 518055, China
  • 2. Key Laboratory for Industrial Biocatalysis, Ministry of Education, Institute of Biochemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
  • 3. Department of Life Sciences, Chalmers University of Technology, Gothenburg SE412 96, Sweden
  • 4. Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark
  • 5. Department of Biology, Boston University, Boston, MA 02215, USA
  • 6. Bioinformatics Program, Boston University, Boston, MA 02215, USA
  • 7. BioInnovation Institute, Ole Maaloes Vej 3, DK2200 Copenhagen N, Denmark
  • 8. Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA
  • 9. Department of Medical Biochemistry and Cell Biology, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, SE-405 30 Gothenburg, Sweden
  • 10. ELIXIR, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, United Kingdom
  • 11. Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
  • 12. SciLifeLab, Chalmers University of Technology, SE-412 96, Gothenburg, Sweden

Description

This repository contains the models, data, and scripts associated with the publication "Human2: Improved reconstruction of human metabolism through combining community efforts with large language models".

Files

developWBM.zip

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