Published March 25, 2025 | Version v1

ImageJ macro to adjust brightness, contrast and colors of OM images and export as TIFF with scale bar

  • 1. ROR icon Freie Universität Berlin
  • 2. ROR icon Zuse Institute Berlin

Description

This ImageJ macro automates the processing and export of optical microscopy images. It recursively scans a specified input directory for image files with a user-defined suffix, processes the images by enhancing contrast and applying color adjustments, and exports the final results as TIFF files to an output directory.

Files

User Protocol.pdf

Files (87.0 kB)

Name Size Download all
md5:21e12ab1d8decf581aef509936e6ff7e
2.4 kB Download
md5:85be145e2e82d576455e57a3c30a9c04
2.4 kB Download
md5:ecdd6ba3b238013bc90f4d6f2ffe252e
82.1 kB Preview Download

Additional details

Funding

Deutsche Forschungsgemeinschaft
CRC1449 Dynamic Hydrogels at Biointerfaces 431232613
Deutsche Forschungsgemeinschaft
Core Facility BioSupraMol 213868804
Senatsverwaltung für Gesundheit, Pflege und Gleichstellung
Supramolecular Functional Architectures at Biological Interfaces (SupraFAB) BE-1381006

Dates

Created
2025-03-25

Software

Programming language
ImageJ Macro