PHILHARMONIC Results for P. damicornis, C. goreaui, and D. melanogaster
Authors/Creators
Description
PHILHARMONIC is a novel computational approach that couples deep learning de novo network inference with robust unsupervised spectral clustering algorithms to uncover functional relationships and high-level organization in non-model organisms. Our clustering approach allows us to de-noise the predicted network, producing highly informative functional modules.
We apply PHILHARMONIC to predict clusters with significant functional coherence in the reef-building coral P. damicornis and its algal symbiont C. goreaui, and the well-annotated fruit fly D. melanogaster.
Files
pdamicornis_human_readable.txt
Files
(251.9 MB)
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Additional details
Related works
- Is part of
- Preprint: 10.1101/2024.10.25.620267 (DOI)
Software
- Repository URL
- https://github.com/samsledje/philharmonic
- Programming language
- Python