Published March 20, 2025
| Version 1.5.0
Software
Open
The nf-core framework for community-curated bioinformatics pipelines.
Description
The following enhancements have been included in this release:
- Assembly Stats Calculations : Additional assembly statistics are calculated using the NCBI database file located in ${baseDir}/assets/databases/. This allows for the calculation of the expected length:actual length genome ratio. This updated statistic is included in Spriggan's output file. - Automatic Filtering of Empty Samples : The pipeline now automatically filters out empty samples. These filtered samples are recorded in the Rejected_samples directory for reference.
Notes
If you use `nf-core tools` in your work, please cite the `nf-core` publication
Files
wslh-bio/spriggan-1.5.0.zip
Files
(471.2 MB)
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md5:ce59549cf64596f3304ca698958eeef5
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Additional details
Related works
- Is supplement to
- Software: https://github.com/wslh-bio/spriggan/tree/1.5.0 (URL)
Software
- Repository URL
- https://github.com/wslh-bio/spriggan