nipy/nipype: 1.9.1

Esteban, Oscar; Markiewicz, Christopher J.; Burns, Christopher; Goncalves, Mathias; Jarecka, Dorota; Ziegler, Erik; Berleant, Shoshana; Ellis, David Gage; Pinsard, Basile; Madison, Cindee; Waskom, Michael; Notter, Michael Philipp; Clark, Daniel; Manhães-Savio, Alexandre; Halchenko, Yaroslav O.; Clark, Dav; Jordan, Kesshi; Dayan, Michael; Norgaard, Martin; Loney, Fred; Papadopoulos Orfanos, Dimitri; Salo, Taylor; Johnson, Hans; Dewey, Blake E; Bougacha, Salma; Keshavan, Anisha; Yvernault, Benjamin; Christian, Horea; Hamalainen, Carlo; Ćirić, Rastko; Dubois, Mathieu; Joseph, Michael; Cipollini, Ben; Tilley II, Steven; Visconti di Oleggio Castello, Matteo; De La Vega, Alejandro; Wong, Jason; Kaczmarzyk, Jakub; Huntenburg, Julia M.; Clark, Michael G.; Kent, James D.; Benderoff, Erin; Erickson, Drew; Dias, Maria de Fatima; Moloney, Brendan; Hanke, Michael; Giavasis, Steven; Nichols, B. Nolan; Tungaraza, Rosalia; Dell'Orco, Andrea; Frohlich, Caroline; Wassermann, Demian; de Hollander, Gilles; Kepler, Gal; Koudoro, Serge; Eshaghi, Arman; Millman, Jarrod; Mancini, Matteo; Close, Thomas; Nielson, Dylan M.; Varoquaux, Gael; Waller, Lea; Watanabe, Aimi; Mordom, David; Cluce, Jon; Guillon, Jérémy; Robert-Fitzgerald, Timothy; Chetverikov, Andrey; Rokem, Ariel; Acland, Benjamin; Bernardoni, Fabio; Forbes, Jessica; Markello, Ross; Gillman, Ashley; Kong, Xiang-Zhen; Geisler, Daniel; Salvatore, John; Espana, Lezlie; Gramfort, Alexandre; Doll, Anna; Buchanan, Colin; DuPre, Elizabeth; Liu, Siqi; Schaefer, Alexander; Kleesiek, Jens; Butry, Lionel; Sikka, Sharad; Schwartz, Yannick; Ghayoor, Ali; Vaillant, Ghislain; Lee, John A.; Mattfeld, Aaron; Richie-Halford, Adam; Liem, Franz; Perez-Guevara, Martin Felipe; Heinsfeld, Anibal Sólon; Haselgrove, Christian; Durnez, Joke; Lampe, Leonie; Poldrack, Russell; Glatard, Tristan; Baratz, Zvi; Tabas, Alejandro; Cumba, Chad; Pérez-García, Fernando; Genovese, Maurilio; Blair, Ross; Iqbal, Shariq; Welch, David; Condamine, Eric; Contier, Oliver; Triplett, William; Craddock, R. Cameron; Correa, Carlos; Stadler, Jörg; Warner, Joshua; Sisk, Lucinda M.; Falkiewicz, Marcel; Sharp, Paul; Rothmei, Simon; Kim, Sin; Weinstein, Alejandro; Kahn, Ari E.; Kastman, Erik; Bottenhorn, Katherine; Grignard, Martin; Perkins, L. Nathan; Anijärv, Toomas Erik; Zhou, Dale; Bielievtsov, Dmytro; Cooper, Gavin; Stojic, Hrvoje; Hui Qian, Tan; Linkersdörfer, Janosch; Renfro, Mandy; Hinds, Oliver; Stanley, Olivia; Velasco, Pablo; Küttner, René; Pauli, Wolfgang M.; Wu, Jianxiao; Xie, Xihe; Glen, Daniel; Kimbler, Adam; Meyers, Benjamin; Tarbert, Claire; Ginsburg, Daniel; Haehn, Daniel; Margulies, Daniel S.; Ma, Feilong; Malone, Ian B.; Snoek, Lukas; Brett, Matthew; Cieslak, Matthew; Hallquist, Michael; Molina-Romero, Miguel; Bilgel, Murat; Lee, Nat; Kuntke, Paul; Jalan, Raunak; Inati, Souheil; Gerhard, Stephan; Mathotaarachchi, Sulantha; Saase, Victor; Van, Andrew; Petre, Bogdan; Steele, Christopher John; Ort, Eduard; Lerma-Usabiaga, Garikoitz; Schwabacher, Isaac; Arias, Jaime; Lai, Jeff; Pellman, John; Huguet, Jordi; Junhao WEN; Leinweber, Katrin; Chawla, Kshitij; Weninger, Leon; Modat, Marc; Bannert, Michael M.; Mukhometzianov, Rinat; Harms, Robbert; Andberg, Sami Kristian; Matsubara, K; González Orozco, Abel A.; Routier, Alexandre; Marina, Ana; Davison, Andrew; Floren, Andrew; Park, Anne; Frederick, Blaise; Cheung, Brian; McDermottroe, Conor; McNamee, Daniel; Shachnev, Dmitry; Vogel, Dorian; Flandin, Guillaume; Jones, Henry; Gonzalez, Ivan; Varada, Jan; Schlamp, Kai; Podranski, Kornelius; Huang, Lijie; Noel, Maxime; Pannetier, Nicolas; Numssen, Ole; Khanuja, Ranjeet; Urchs, Sebastian; Shim, Sunjae; Nickson, Thomas; Huang, Lijie; Broderick, William; Tambini, Arielle; Mihai, Paul Glad; Gorgolewski, Krzysztof J.; Ghosh, Satrajit

doi:10.5281/zenodo.15054184

Published March 20, 2025 | Version 1.9.1

Software Open

nipy/nipype: 1.9.1

1. Department of Psychology, Stanford University
2. Stanford University
3. MIT
4. Independent
5. The University of Iowa
6. The Laboratory for Investigative Neurophysiology (The LINE), Department of Radiology and Department of Clinical Neurosciences, Lausanne, Switzerland; Center for Biomedical Imaging (CIBM), Lausanne, Switzerland
7. Developer
8. Klinikum rechts der Isar, TUM. ACPySS
9. Dartmouth College: Hanover, NH, United States
10. UC Berkeley
11. University of California, San Francisco
12. Mayo Clinic, Neurology, Rochester, MN, USA
13. CEA
14. Florida International University
15. University of Iowa
16. Department of Electrical and Computer Engineering, Johns Hopkins University
17. Molecular Imaging Research Center, CEA, France
18. UC Berkeley - UCSF Graduate Program in Bioengineering
19. Institute for Biomedical Engineering, ETH and University of Zurich
20. The Centre for Addiction and Mental Health
21. UC San Diego
22. Holland Bloorview Kids Rehabilitation Hospital
23. Dartmouth College
24. University of Texas at Austin
25. Shattuck Lab, UCLA Brain Mapping Center
26. Research Group Neuroanatomy and Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
27. National Institutes of Health
28. Neuroscience Program, University of Iowa
29. Concordia University
30. CIBIT, UC
31. Otto-von-Guericke-University Magdeburg, Germany
32. Child Mind Institute
33. SRI International
34. Charitè Universitätsmedizin Berlin, Germany
35. Athena EPI, Inria Sophia-Antipolis
36. Vrije Universiteit, Amsterdam
37. Sagol School of Neuroscience, Tel Aviv University
38. Indiana University, IN, USA
39. University College London
40. University of Sydney
41. National Institute of Mental Health
42. INRIA
43. Charite Universitatsmedizin Berlin, Germany
44. ARAMIS LAB, Brain and Spine Institute (ICM), Paris, France.
45. Penn Statistics in Imaging and Visualization Endeavor, University of Pennsylvania
46. Donders Institute for Brain, Cognition and Behavior, Center for Cognitive Neuroimaging
47. The University of Washington eScience Institute
48. Washington University in St Louis
49. Division of Psychological and Social Medicine and Developmental Neuroscience, Faculty of Medicine, Technische Universität Dresden, Dresden, Germany
50. Montreal Neurological Institute and Hospital
51. Australian eHealth Research Centre, Commonwealth Scientific and Industrial Research Organisation; University of Queensland
52. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China; Max Planck Institute for Psycholinguistics, Nijmegen, the Netherlands
53. Medical College of Wisconsin
54. CNRS LTCI, Telecom ParisTech, Université Paris-Saclay
55. Department of Psychology, University of Bielefeld, Bielefeld, Germany.
56. The University of Sydney
57. National University Singapore
58. UniversityHospital Heidelberg, Germany
59. Department of Neurology, BG-University Hospital Bergmannsheil Bochum, Germany
60. Nathan s Kline institute for psychiatric research
61. ARAMIS Lab, Paris Brain Institute
62. NIMH IRP
63. University of Washington
64. University of Zurich
65. Neurospin/Unicog/Inserm/CEA
66. Department of Psychology, Stanford University; Parietal, INRIA
67. MPI CBS Leipzig, Germany
68. 1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montréal, 3801 University Street, WB-208, H3A 2B4, Québec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.
69. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
70. Azienda Ospedaliero-Universitaria di Modena
71. Duke University
72. CNRS, UMS3552 IRMaGe
73. Max Planck Institute for Human Cognitive and Brain Sciences
74. Leibniz Institute for Neurobiology
75. Mayo Clinic
76. Yale University; New Haven, CT, United States
77. University of Illinois Urbana Champaign
78. Korea Advanced Institute of Science and Technology
79. University of Pennsylvania
80. Harvard University - Psychology
81. GIGA Institute
82. Boston University
83. Lund University
84. University of Newcastle, Australia
85. Max Planck UCL Centre for Computational Psychiatry and Ageing Research, University College London
86. German Institute for International Educational Research
87. Dept of Medical Biophysics, Univeristy of Western Ontario
88. Flywheel.io, Minneapolis, MN, USA.
89. California Institute of Technology
90. Research Centre Juelich
91. Weill Cornell Medicine
92. NIMH, Scientific and Statistical Computing Core
93. University of Pittsburgh
94. Max Planck Research Group for Neuroanatomy & Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
95. University of Amsterdam
96. Department of Neuropsychiatry, University of Pennsylvania
97. Technical University Munich
98. National Institute on Aging, Baltimore, MD, USA
99. Insitiute and Polyclinc for Diagnostic and Interventional Neuroradiology, University Hospital Carl Gustav Carus, Dresden, Germany
100. Institute of Neuroinformatics, ETH/University of Zurich
101. Enigma Biomedical Group
102. Department of Psychological and Brain Sciences, Dartmouth College
103. MPI-CBS; McGill University
104. Vrije Universiteit Amsterdam
105. Child Mind Institute / Nathan Kline Institute
106. BarcelonaBeta Brain Research Center
107. TIB – Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany
108. INRIA-Saclay, Team Parietal
109. Institute of Imaging & Computer Vision, RWTH Aachen University, Germany
110. University of Tübingen and MPI for Biological Cybernertics
111. University of Waterloo
112. University of Helsinki
113. Universidad de Guadalajara
114. ARAMIS Lab
115. The University of Texas at Austin
116. Consolidated Department of Psychiatry, Harvard Medical School
117. University of Cambridge
118. University of Applied Sciences and Arts Northwestern Switzerland
119. Stanford University and the University of Chicago
120. Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, MA, USA
121. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
122. Medical Imaging & Biomarkers, Bioclinica, Newark, CA, USA.
123. MIT, HMS

Release Notes

Bug fix release in the 1.9.x series.

This release adds support for Numpy 2 and Python 3.13.

What's Changed

FIX: Restore generate_gantt_chart functionality (https://github.com/nipy/nipype/pull/3290)
FIX: Address numpy and traits deprecations (https://github.com/nipy/nipype/pull/3699)
FIX: ts_Z_corr → ts_wb_Z (https://github.com/nipy/nipype/pull/3697)
ENH: Remove unused and recently unsupported antsRegistration flag (https://github.com/nipy/nipype/pull/3695)
MAINT: Bump codecov/codecov-action from 4 to 5 (https://github.com/nipy/nipype/pull/3698)

New Contributors

@shnizzedy made their first contribution in https://github.com/nipy/nipype/pull/3697

Full Changelog: https://github.com/nipy/nipype/compare/1.9.0...1.9.1

Files

nipy/nipype-1.9.1.zip

Files (3.8 MB)

Name	Size	Download all
nipy/nipype-1.9.1.zip md5:ca18b68dd5b2325252a51023de695d18	3.8 MB	Preview Download

Additional details

Is supplement to: Software: https://github.com/nipy/nipype/tree/1.9.1 (URL)

Repository URL: https://github.com/nipy/nipype

	All versions	This version
Views	32,636	1,986
Downloads	3,742	88
Data volume	15.6 GB	331.2 MB

nipy/nipype: 1.9.1

Authors/Creators

Description

Release Notes

What's Changed

New Contributors

Files

nipy/nipype-1.9.1.zip

Files (3.8 MB)

Additional details

Related works

Software