nipy/nipype: 1.11.0

Esteban, Oscar; Markiewicz, Christopher J.; Burns, Christopher; Goncalves, Mathias; Jarecka, Dorota; Ziegler, Erik; Berleant, Shoshana; Ellis, David Gage; Pinsard, Basile; Madison, Cindee; Waskom, Michael; Notter, Michael Philipp; Clark, Daniel; Manhães-Savio, Alexandre; Halchenko, Yaroslav O.; Clark, Dav; Jordan, Kesshi; Dayan, Michael; Norgaard, Martin; Loney, Fred; Papadopoulos Orfanos, Dimitri; Salo, Taylor; Johnson, Hans; Dewey, Blake E; Bougacha, Salma; Keshavan, Anisha; Yvernault, Benjamin; Christian, Horea; Hamalainen, Carlo; Ćirić, Rastko; Dubois, Mathieu; Joseph, Michael; Cipollini, Ben; Tilley II, Steven; Visconti di Oleggio Castello, Matteo; De La Vega, Alejandro; Wong, Jason; Kaczmarzyk, Jakub; Huntenburg, Julia M.; Clark, Michael G.; Kent, James D.; Benderoff, Erin; Erickson, Drew; Dias, Maria de Fatima; Moloney, Brendan; Genovese, Maurilio; Hanke, Michael; Giavasis, Steven; Nichols, B. Nolan; Tungaraza, Rosalia; Dell'Orco, Andrea; Frohlich, Caroline; Wassermann, Demian; de Hollander, Gilles; Kepler, Gal; Koudoro, Serge; Eshaghi, Arman; Millman, Jarrod; Mancini, Matteo; Close, Thomas; Nielson, Dylan M.; Varoquaux, Gael; Waller, Lea; Watanabe, Aimi; Mordom, David; Cluce, Jon; Guillon, Jérémy; Robert-Fitzgerald, Timothy; Chetverikov, Andrey; Rokem, Ariel; Acland, Benjamin; Bernardoni, Fabio; Forbes, Jessica; Markello, Ross; Gillman, Ashley; Kong, Xiang-Zhen; Geisler, Daniel; Salvatore, John; Espana, Lezlie; Gramfort, Alexandre; Doll, Anna; Buchanan, Colin; DuPre, Elizabeth; Liu, Siqi; Schaefer, Alexander; Kleesiek, Jens; Butry, Lionel; Sikka, Sharad; Schwartz, Yannick; Ghayoor, Ali; Vaillant, Ghislain; Lee, John A.; Mattfeld, Aaron; Richie-Halford, Adam; Liem, Franz; Perez-Guevara, Martin Felipe; Heinsfeld, Anibal Sólon; Haselgrove, Christian; Durnez, Joke; Lampe, Leonie; Poldrack, Russell; Glatard, Tristan; Baratz, Zvi; Tabas, Alejandro; Cumba, Chad; Pérez-García, Fernando; Blair, Ross; Iqbal, Shariq; Welch, David; Condamine, Eric; Contier, Oliver; Triplett, William; Craddock, R. Cameron; Correa, Carlos; Stadler, Jörg; Warner, Joshua; Sisk, Lucinda M.; Falkiewicz, Marcel; Sharp, Paul; Rothmei, Simon; Kim, Sin; Weinstein, Alejandro; Kahn, Ari E.; Kastman, Erik; Bottenhorn, Katherine; Grignard, Martin; Perkins, L. Nathan; Anijärv, Toomas Erik; Zhou, Dale; Bielievtsov, Dmytro; Cooper, Gavin; Stojic, Hrvoje; Hui Qian, Tan; Linkersdörfer, Janosch; Renfro, Mandy; Hinds, Oliver; Stanley, Olivia; Velasco, Pablo; Küttner, René; Pauli, Wolfgang M.; Wu, Jianxiao; Xie, Xihe; Glen, Daniel; Kimbler, Adam; Meyers, Benjamin; Tarbert, Claire; Ginsburg, Daniel; Haehn, Daniel; Margulies, Daniel S.; Ma, Feilong; Malone, Ian B.; Snoek, Lukas; Brett, Matthew; Cieslak, Matthew; Hallquist, Michael; Molina-Romero, Miguel; Bilgel, Murat; Lee, Nat; Kuntke, Paul; Jalan, Raunak; Inati, Souheil; Gerhard, Stephan; Mathotaarachchi, Sulantha; Saase, Victor; Van, Andrew; Petre, Bogdan; Steele, Christopher John; Ort, Eduard; Lerma-Usabiaga, Garikoitz; Schwabacher, Isaac; Arias, Jaime; Lai, Jeff; Pellman, John; Huguet, Jordi; Junhao WEN; Leinweber, Katrin; Chawla, Kshitij; Weninger, Leon; Modat, Marc; Bannert, Michael M.; Mukhometzianov, Rinat; Harms, Robbert; Andberg, Sami Kristian; Matsubara, K; González Orozco, Abel A.; Routier, Alexandre; Marina, Ana; Davison, Andrew; Floren, Andrew; Park, Anne; Frederick, Blaise; Cheung, Brian; McDermottroe, Conor; McNamee, Daniel; Shachnev, Dmitry; Vogel, Dorian; Flandin, Guillaume; Jones, Henry; Gonzalez, Ivan; Varada, Jan; Schlamp, Kai; Podranski, Kornelius; Huang, Lijie; Noel, Maxime; Pannetier, Nicolas; Numssen, Ole; Khanuja, Ranjeet; Urchs, Sebastian; Shim, Sunjae; Nickson, Thomas; Huang, Lijie; Broderick, William; Tambini, Arielle; Mihai, Paul Glad; Gorgolewski, Krzysztof J.; Ghosh, Satrajit

doi:10.5281/zenodo.18841577

Published March 2, 2026 | Version 1.11.0

Software Open

nipy/nipype: 1.11.0

1. Department of Psychology, Stanford University
2. Stanford University
3. MIT
4. Independent
5. The University of Iowa
6. The Laboratory for Investigative Neurophysiology (The LINE), Department of Radiology and Department of Clinical Neurosciences, Lausanne, Switzerland; Center for Biomedical Imaging (CIBM), Lausanne, Switzerland
7. Developer
8. Klinikum rechts der Isar, TUM. ACPySS
9. Dartmouth College: Hanover, NH, United States
10. UC Berkeley
11. University of California, San Francisco
12. Mayo Clinic, Neurology, Rochester, MN, USA
13. CEA
14. Florida International University
15. University of Iowa
16. Department of Electrical and Computer Engineering, Johns Hopkins University
17. Molecular Imaging Research Center, CEA, France
18. UC Berkeley - UCSF Graduate Program in Bioengineering
19. Institute for Biomedical Engineering, ETH and University of Zurich
20. The Centre for Addiction and Mental Health
21. UC San Diego
22. Holland Bloorview Kids Rehabilitation Hospital
23. Dartmouth College
24. University of Texas at Austin
25. Shattuck Lab, UCLA Brain Mapping Center
26. Research Group Neuroanatomy and Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
27. National Institutes of Health
28. Neuroscience Program, University of Iowa
29. Concordia University
30. CIBIT, UC
31. Azienda Ospedaliero-Universitaria di Modena
32. Otto-von-Guericke-University Magdeburg, Germany
33. Child Mind Institute
34. SRI International
35. Charitè Universitätsmedizin Berlin, Germany
36. Athena EPI, Inria Sophia-Antipolis
37. Vrije Universiteit, Amsterdam
38. Sagol School of Neuroscience, Tel Aviv University
39. Indiana University, IN, USA
40. University College London
41. University of Sydney
42. National Institute of Mental Health
43. INRIA
44. Charite Universitatsmedizin Berlin, Germany
45. ARAMIS LAB, Brain and Spine Institute (ICM), Paris, France.
46. Penn Statistics in Imaging and Visualization Endeavor, University of Pennsylvania
47. Donders Institute for Brain, Cognition and Behavior, Center for Cognitive Neuroimaging
48. The University of Washington eScience Institute
49. Washington University in St Louis
50. Division of Psychological and Social Medicine and Developmental Neuroscience, Faculty of Medicine, Technische Universität Dresden, Dresden, Germany
51. Montreal Neurological Institute and Hospital
52. Australian eHealth Research Centre, Commonwealth Scientific and Industrial Research Organisation; University of Queensland
53. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China; Max Planck Institute for Psycholinguistics, Nijmegen, the Netherlands
54. Medical College of Wisconsin
55. CNRS LTCI, Telecom ParisTech, Université Paris-Saclay
56. Department of Psychology, University of Bielefeld, Bielefeld, Germany.
57. The University of Sydney
58. National University Singapore
59. UniversityHospital Heidelberg, Germany
60. Department of Neurology, BG-University Hospital Bergmannsheil Bochum, Germany
61. Nathan s Kline institute for psychiatric research
62. ARAMIS Lab, Paris Brain Institute
63. NIMH IRP
64. University of Washington
65. University of Zurich
66. Neurospin/Unicog/Inserm/CEA
67. Department of Psychology, Stanford University; Parietal, INRIA
68. MPI CBS Leipzig, Germany
69. 1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montréal, 3801 University Street, WB-208, H3A 2B4, Québec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.
70. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
71. Duke University
72. CNRS, UMS3552 IRMaGe
73. Max Planck Institute for Human Cognitive and Brain Sciences
74. Leibniz Institute for Neurobiology
75. Mayo Clinic
76. Yale University; New Haven, CT, United States
77. University of Illinois Urbana Champaign
78. Korea Advanced Institute of Science and Technology
79. University of Pennsylvania
80. Harvard University - Psychology
81. GIGA Institute
82. Boston University
83. Lund University
84. University of Newcastle, Australia
85. Max Planck UCL Centre for Computational Psychiatry and Ageing Research, University College London
86. German Institute for International Educational Research
87. Dept of Medical Biophysics, Univeristy of Western Ontario
88. Flywheel.io, Minneapolis, MN, USA.
89. California Institute of Technology
90. Research Centre Juelich
91. Weill Cornell Medicine
92. NIMH, Scientific and Statistical Computing Core
93. University of Pittsburgh
94. Max Planck Research Group for Neuroanatomy & Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
95. University of Amsterdam
96. Department of Neuropsychiatry, University of Pennsylvania
97. Technical University Munich
98. National Institute on Aging, Baltimore, MD, USA
99. Insitiute and Polyclinc for Diagnostic and Interventional Neuroradiology, University Hospital Carl Gustav Carus, Dresden, Germany
100. Institute of Neuroinformatics, ETH/University of Zurich
101. Enigma Biomedical Group
102. Department of Psychological and Brain Sciences, Dartmouth College
103. MPI-CBS; McGill University
104. Vrije Universiteit Amsterdam
105. Child Mind Institute / Nathan Kline Institute
106. BarcelonaBeta Brain Research Center
107. TIB – Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany
108. INRIA-Saclay, Team Parietal
109. Institute of Imaging & Computer Vision, RWTH Aachen University, Germany
110. University of Tübingen and MPI for Biological Cybernertics
111. University of Waterloo
112. University of Helsinki
113. Universidad de Guadalajara
114. ARAMIS Lab
115. The University of Texas at Austin
116. Consolidated Department of Psychiatry, Harvard Medical School
117. University of Cambridge
118. University of Applied Sciences and Arts Northwestern Switzerland
119. Stanford University and the University of Chicago
120. Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, MA, USA
121. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
122. Medical Imaging & Biomarkers, Bioclinica, Newark, CA, USA.
123. MIT, HMS

This release modernizes Nipype's legacy packaging. Key changes include better error propagation when utilizing run_without_submitting, proper quoting of paths with spaces, a fix for SPM v25 outputs, enhancements to dcm2niix, support for dynamic RAM estimation, and a revamped CI process for pre‑release tests.

FIX: Propagate errors encountered when using run_without_submitting (https://github.com/nipy/nipype/pull/3745)
FIX: Properly quote file paths with spaces (https://github.com/nipy/nipype/pull/3739)
FIX: Catch OSError from getpass.getuser (https://github.com/nipy/nipype/pull/3728)
FIX: SPM output type for version 25 (https://github.com/nipy/nipype/pull/3734)
ENH: Add -w flag to dcm2niix interface (https://github.com/nipy/nipype/pull/3723)
ENH: Dynamic RAM estimator (https://github.com/nipy/nipype/pull/3740)
MAINT: Modernize packaging (https://github.com/nipy/nipype/pull/3742)
CI: Split pre-release tests into cron job, open issues on failure (https://github.com/nipy/nipype/pull/3746)

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Is supplement to: Software: https://github.com/nipy/nipype/tree/1.11.0 (URL)

Repository URL: https://github.com/nipy/nipype

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nipy/nipype: 1.11.0

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