Published March 19, 2025
| Version v1.2.0
Software
Open
AliNe: A Flexible and Efficient Nextflow Pipeline for Read Alignment
Authors/Creators
Description
Add bwa-mem2 Add salmon ngmlr and sublong can now works with paired-en reads Standardize information and user interaction at the beginning of Aline when checking tools and params Fix error when using long reads with bwasw, options "-x ont2d" and "-x pacbio" not usable (only for bwamem) Update tests and Readme
Notes
If you use this software, please cite our article in the Journal of Open Source Software.
Files
Juke34/AliNe-v1.2.0.zip
Files
(4.3 MB)
| Name | Size | Download all |
|---|---|---|
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md5:32a421ce03bdb5b7f191e09cf512af8a
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4.3 MB | Preview Download |
Additional details
Related works
- Is supplement to
- Software: https://github.com/Juke34/AliNe/tree/v1.2.0 (URL)
Software
- Repository URL
- https://github.com/Juke34/AliNe