Published March 6, 2025
| Version v1
Dataset
Open
Transforming growth factor-β (TGF-β) signalling, fibrosis, and extracellular matrix deposition in the masseter muscle of mdx5cv mice
Description
ScoreFibers.groovy is the groovy script to be used with QuPath 0.5.1 to segment muscle fibers and central nuclei.
MF_E5000 is the Cellpose custom model used to segment muscle fibers. This model is called by the ScoreFibers.groovy script.
Find_Fibrosis.groovy is the groovy script to be used with QuPath 0.5.1 to segment fibrosis from fastGreenSirius staining
Files
Files
(26.6 MB)
| Name | Size | Download all |
|---|---|---|
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md5:b85d6dbac165d40da5d7be1ab4ad963a
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704 Bytes | Download |
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md5:ab51693b44cea01a30c8d05445eacb57
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26.6 MB | Download |
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md5:eaaff2a9c68274132db1f5b485d2bd6b
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5.9 kB | Download |