Test small datasets for Shiba and scShiba

This repository provides example inputs for Shiba, a versatile computational method for systematic identification of differential RNA splicing across platforms (https://github.com/Sika-Zheng-Lab/Shiba).

test_shiba.tar.gz contains four RNA-seq bam files (Ref_1.bam, Ref_2.bam, Alt_1.bam, Alt_2.bam). Useful for testing Shiba and SnakeShiba pipelines.

test_scshiba.tar.gz contains a text file that describes barcodes and corresponding clusters (Cluster-1 or Cluster-2) and STARsolo outputs. Useful for testing scShiba and SnakeScShiba pipelines.