Data from: Lungless tadpoles breathe fresh air into hypotheses for tetrapod lung loss and trait regain

The environmental factors associated with adaptive trait loss and the extent to which lost traits can be regained have been subject to much speculation and debate in evolutionary biology. We use tadpole lungs to test if previously proposed environmental factors, such as a stream habitat, are associated with larval lung loss and whether lungs can be regained following loss. We assembled a dataset of lung presence for the larvae of 529 anurans, finding 28 instances of larval lung loss, and developed a methodological framework to test the evolutionary associations between lung loss, general habitat type, terrestriality, and stream specialization, finding strong support for the final two factors in adaptive lung loss. The likelihood of regain is thought to depend on whether developmental pathways are preserved over time; accordingly, we predicted larval lung loss to be highly reversible. And yet, we found that larval lungs were never regained, despite lungless tadpoles evolving to live in habitats that favor lung use and all lungless tadpoles developing into lunged frogs. Traditional explanations of irreversibility do not easily explain why stage-specific trait loss would be irreversible, prompting us to examine alternative explanations for natural patterns of irreversibility observed across the tree of life.