Published April 2, 2025
| Version revision1
Dataset
Open
pQTL-mapping-rev1
Authors/Creators
-
1.
Berlin Institute of Health at Charité - Universitätsmedizin Berlin
-
2.
Charité - Universitätsmedizin Berlin
- 3. Charite Universitaetsmedizin Berlin
-
4.
The Francis Crick Institute
Description
Contains code to replicate genetic mapping and figures for pQTN manuscript (submitted; pre-print on bioRxiv):
https://www.biorxiv.org/content/10.1101/2024.10.18.619054v1
plotting_master_script.m will generate the figures in the manuscript. Specify your local code_directory, desired output_directory for the figure files, and download the dependencies and specify the dependency_directory to run the script.
Also included are functions and example Snakemake file for pQTN mapping on SWATH-MS data.
Files
Files
(7.8 GB)
| Name | Size | Download all |
|---|---|---|
|
md5:cc583691957e04e074f4306772793ecd
|
421.2 kB | Download |
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md5:42b5e528320cb9a8e05b1597f13965bc
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7.8 GB | Download |
Additional details
Software
- Repository URL
- https://github.com/cjakobson/pqtl-mapping