Published February 26, 2025
| Version v1
Resources: "H2MM-Guided Removal of Dye Blinking Effects from Single-Molecule FRET Burst Data"
Description
This repository contains jupyter notebooks used to simulate burst smFRET data with artbitraty FRET states and blinking dynamics, as well as an accompianing mpH2MM analysis notebook.
Simulated data is provided to explore the impact of blinking on mpH2MM analysis.
Files
1_Trajectory_Simulation.ipynb
Files
(577.6 MB)
| Name | Size | |
|---|---|---|
|
md5:c6d802c179f6faeb1b6e9e822c2db2a9
|
6.4 kB | Preview Download |
|
md5:2a8529cf3efa59dd3012f24c7c46f5a9
|
182.8 kB | Preview Download |
|
md5:16c18844ffc66639d940562ad370f847
|
35.0 kB | Preview Download |
|
md5:bb6e83cf0feecbe6a927631ebf9f9a91
|
32.0 kB | Preview Download |
|
md5:80766e52a2cb8706bf5b4d9078943d92
|
239.7 MB | Preview Download |
|
md5:fecac3c16760a99881b06e084ccb571e
|
3.2 MB | Preview Download |
|
md5:edc43a356ea3ed718e3ed787e3cd098f
|
16.3 kB | Download |
|
md5:b573a3a1dece28029eda530b29a55d5b
|
62.8 MB | Preview Download |
|
md5:b69afe507eb4e67b36e3aaa0ae504be9
|
271.6 MB | Preview Download |
Additional details
Related works
- Is source of
- Standard: 10.1186/s44330-025-00039-2 (DOI)
Software
- Programming language
- Python , Jupyter Notebook