Published February 19, 2025 | Version v2
Dataset Open

¹H,¹³C HSQC NMR Spectra (Supplemental Data to "Network Flow Methods for NMR-Based Compound Identification")

  • 1. ROR icon Carl von Ossietzky Universität Oldenburg

Description

The dataset contains pre-processed ¹H and ¹H,¹³C HSQC NMR spectra of mixtures containing up to 34 individual compounds, including: 9-anthracenecarboxylic acid, anthranilic acid, 1,2,3-benzenetricarboxylic acid, 1,2,4-benzenetricarboxylic acid, benzoic acid, biotin, citric acid, L-cysteine, D-glucose, L-glutamic acid, L-glutamine, 4-hydroxybenzoic acid, 4-hydroxycinnamic acid, L-isoleucine, L-leucine, malonic acid, D-mannose, L-methionine, nicotinic acid, octanoic acid, L-phenylalanine, 4-phenylbutanoic acid, pimelic acid, L-proline, L-rhamnose, raffinose, succinic acid, L-tartaric acid, tetradecanoic acid, trans-cinnamic acid, L-tryptophane, L-tyrosine, vanillic acid, D-xylose. The mixtures with the following compositions and concentrations were prepared in DMSO-d₆ spiked with 3-(trimethylsilyl)propionic-2,2,3,3-d₄ acid sodium salt (TSP-d₄) as internal standard:

Ia–Ic: Mixtures, containing all 34 compounds in identical concentrations (Ia: 3.0 mM, Ib: 0.3 mM, Ic: 0.03 mM);
IIa–IIc: Mixtures, containing four selected compounds (1,2,3-benzenetricarboxylic acid, D-glucose, pimelic acid, L-tyrosine) in identical concentrations (IIa: 30 mM, IIb: 3.0 mM, IIc: 0.3 mM);
IIIa–IIIc: Mixtures, containing the four selected compounds of mixtures IIa–IIc in identical concentrations (IIIa: 15.15 mM, IIIb: 1.65 mM, IIIc: 0.3 mM) along with the remaining 30 compounds at lower concentration (0.15 mM).

The files designated as "nmr_<MIX_ID>_01.txt.gz" contain the corresponding ¹H,¹³C HSQC spectra of these mixtures. "nmr_IIa_1H.csv.gz" contains the 1D ¹H spectrum of mixture IIa for testing the applicablity of the MCF method for 1D spectra reconstruction. (Please note that the ¹H chemical shifts and peak proportionalities for the 1D test case were derived from the corresponding ¹H,¹³C HSQC spectra and that a complete implementation of 1D NMR data analysis would require a database of 1D spectra.) The file "peaklists_compounds.csv" includes the ¹H and ¹³C chemical shifts and corresponding integral values for all compounds derived from their individual HSQC spectra.

Comprehensive details on mixture preparations, NMR data acquisition, and processing are available in the accompanying publication.

Files

peaklists_compounds.csv

Files (242.9 MB)

Name Size Download all
md5:a6eb663e3120b396a292088c712d26a5
27.0 MB Download
md5:7260f2df3a994b29a6965c07e7ca464c
26.7 MB Download
md5:35b31be00c8387a98cd1d24ab68cdc05
26.5 MB Download
md5:0cb8e729ae7c528c899200174537f9c3
27.2 MB Download
md5:fc92197bdb11e68441ce60c5c75bc26f
1.6 MB Download
md5:b5e2fe0bdb55a979c8330f23ee01d1d0
26.9 MB Download
md5:9ab8145c81d5d2256fa508a2ada3a306
26.4 MB Download
md5:faf79197843e34265451cef3c104bcbc
26.9 MB Download
md5:ed6006a9520052e779d83441dcbb2c15
26.9 MB Download
md5:e662d4aaa200a795a85510ce4ae2e6e3
26.8 MB Download
md5:07330180cd7001cbf26e81d18aa56d97
6.7 kB Preview Download

Additional details

Related works

Is supplement to
Journal article: 10.1021/acs.analchem.4c01652 (DOI)

Funding

Volkswagen Foundation
Global Carbon Cycling and Complex Molecular Patterns in Aquatic Systems: Integrated Analyses Powered by Semantic Data Management.