Published February 15, 2025
| Version 1.8
Dataset
Open
geNomad database
Description
Marker database used by geNomad for virus and plasmid identification.
- genomad_db_v1.8.tar.gz: MMseqs2 profile database. Entries are decorated with taxonomy information from a custom taxdump based on ICTV's MSL39.
- genomad_hmm_v1.8.tar.gz: HMMER HMM models.
- genomad_metadata_v1.8.tsv.gz: Metadata for all the 227,918 markers.
- genomad_msa_v1.8.tar.gz: Multiple sequence alignments in FASTA format.
Files
Files
(5.0 GB)
| Name | Size | Download all |
|---|---|---|
|
md5:7318e9f9f6a57654ad8d5ce8b8355f8d
|
841.9 MB | Download |
|
md5:066f6f8cb486fadb71076cb10a8363b3
|
3.5 GB | Download |
|
md5:410d7e0fb5d8912b3d5fd38b8bf63e97
|
7.2 MB | Download |
|
md5:054e3930761bfdda758e9418c929569d
|
681.9 MB | Download |