Unifying the Identification of Biomedical Entities with the Bioregistry

Commits

• 1c69c14: Bump version: 0.11.35 → 0.11.36-dev (Charles Tapley Hoyt)
• dc651ee: Add explicit contact and attribution policy (Charles Tapley Hoyt)
• 39ba3f9: Add prefix: eubopen (#1378) (Nalika Palayoor) #1378
• fa48931: Add prefix: deims (#1382) (github-actions[bot]) #1382
• 57ab5ad: Generate JSON schema with Pydantic 2 (#1210) (Charles Tapley Hoyt) #1210
• b5b8274: Apply black 2025 formatting (#1390) (Charles Tapley Hoyt) #1390
• fedaae7: Require Pydantic 2 (#1391) (Charles Tapley Hoyt) #1391
• f0a1f0f: Start applying ruff (#1371) (Charles Tapley Hoyt) #1371
• e315071: Update predictions file with papers between 2025-01-02 and 2025-02-01 (github-actions[bot])
• 177d904: Override URI format for SIO (#1395) (Benjamin M. Gyori) #1395
• 9be5cd2: 🫀Health Report (GitHub Action)
• ace8b61: Update ECCODE pattern to allow optional dashes (#1396) (Benjamin M. Gyori) #1396
• e83e2f4: Adjust the dates for paper_ranking pipeline to be from the first to the last of the previous month (#1402) (Mufaddal Naguthanawala) #1402
• 89221aa: Add prefix: mibig (#1408) (github-actions[bot]) #1408
• a1283c3: New prefix: mirgenedb (#1393) (Nalika Palayoor) #1393
• 3b9f87d: Update curated_papers.tsv with irrelevant curations (#1380) (Nalika Palayoor) #1380
• cf18218: 🫀Health Report (GitHub Action)
• 60c44c3: Fixing GO entries (#1411) (Chris Mungall) #1411
• c0f9641: New schema field - contact page (#1392) (Charles Tapley Hoyt) #1392
• 7fae7ba: Rename clingene to clingen.allele (#1412) (Mufaddal Naguthanawala) #1412
• 7005a15: Update URI formats for tair.locus and tair.protein (#1386) (Benjamin M. Gyori) #1386
• 7b35140: New publication: rgd (#1399) (Nalika Palayoor) #1399
• ba174d0: New prefix: psskb (#1398) (Nalika Palayoor) #1398
• 6fdc2c6: Rename eccode to ec (#1413) (Mufaddal Naguthanawala) #1413
• 8436c96: New prefix: holofood (#1400) (Nalika Palayoor) #1400
• c32768c: Update curated_papers.tsv with irrelevant curations (#1401) (Nalika Palayoor) #1401
• 9fa6bdf: New schema field - secondary contact list (#1388) (Charles Tapley Hoyt) #1388
• d97de9a: New schema field - group email (#1389) (Charles Tapley Hoyt) #1389
• 8f33ba9: New schema element: secondary reviewers (#1415) (Charles Tapley Hoyt) #1415
• 79f405f: Add prefix: mite (#1406) (github-actions[bot]) #1406
• 38f25fe: Show provenance for annotations in web app (#1095) (Charles Tapley Hoyt) #1095
• 04515e8: Bump version: 0.12.0-dev → 0.12.0 (Charles Tapley Hoyt)