Published February 10, 2025 | Version v2

Data from -- Automated Thoracolumbar Stump Rib Detection and Analysis in a Large CT Cohort

  • 1. TUM University Hospital
  • 2. ROR icon Universitätsmedizin Rostock
  • 3. ROR icon Klinikum rechts der Isar

Description

This Upload contains the segmentations used in the paper titled "Automated Thoracolumbar Stump Rib Detection and Analysis in a Large CT Cohort".

Rib segmentation masks for:

  • Public VerSe Dataset
  • Public RibFrac Dataset

It contains the predictions of our segmentation model as well as manually corrected samples that were used for training/testing. The segmentation masks are binary and differentiate between rib (1) and background (0).

This upload also contains the nnUNet model weights for the rib segmentation model that was used to create them.

 

If you use any of the contents provided, cite our publication:

[1] H. Möller, H. Schön, B. C. Keinertand J. Kirschke, “Data from -- Automated Thoracolumbar Stump Rib Detection and Analysis in a Large CT Cohort”. Deep-Spine "iback-epic" Research Group, Feb. 11, 2025. doi: 10.5281/zenodo.14850929.

@article{moller2025automated,
  title={Automated Thoracolumbar Stump Rib Detection and Analysis in a Large CT Cohort},
  author={M{\"o}ller, Hendrik and Sch{\"o}n, Hanna and Dima, Alina and Keinert-Weth, Benjamin and Graf, Robert and Atad, Matan and Paetzold, Johannes and Jungmann, Friederike and Braren, Rickmer and Kofler, Florian and others},
  journal={arXiv preprint arXiv:2505.05004},
  year={2025}
}

Files

ribfrac_rib_manual.zip

Files (998.5 MB)

Name Size
md5:61ebb5fa09d67edacb506b1e0230a946
14.2 MB Preview Download
md5:db2dc940c35faeaf71554ab293205ca6
199.5 MB Preview Download
md5:a3fa6ac14de2c23c6299f61c36ce0fad
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md5:46ab8987e476cc5da23920e27a9c6e67
6.4 MB Preview Download
md5:4ad34c16682d3572681757d966ccccb4
82.8 MB Preview Download

Additional details

Additional titles

Alternative title
Rib Segmentation for VerSe and RibFrac

Dates

Available
2025-02-01

Software

Repository URL
https://github.com/Hendrik-code/rib-segmentation
Programming language
Python
Development Status
Active

References

  • @article{moller2025automated, title={Automated Thoracolumbar Stump Rib Detection and Analysis in a Large CT Cohort}, author={M{\"o}ller, Hendrik and Sch{\"o}n, Hanna and Dima, Alina and Keinert-Weth, Benjamin and Graf, Robert and Atad, Matan and Paetzold, Johannes and Jungmann, Friederike and Braren, Rickmer and Kofler, Florian and others}, journal={arXiv preprint arXiv:2505.05004}, year={2025} }