Published February 5, 2025
| Version 1.0.1
Dataset
Open
Syzygium jambos genome assembly and annotation
Authors/Creators
Description
De novo genome assembly and annotation of Syzygium jambos.
The following files are available:
- sjam.fa.gz: reference genome sequence in fasta format
- sjam.gff3.gz: gene annotation in GFF3 format
- sjam.gtf.gz: gene annotation in GTF format
- sjam.tx.fa.gz: transcript sequences in fasta format
- sjam.cds.fa.gz: coding sequences in fasta format
- sjam.prot.fa.gz: protein sequences in fasta format
- sjam.tsv.gz: gene functional annotation in TSV format
- sjam.chr_to_id.tsv.gz: mapping of sequence names to ids in TSV format
Files
Files
(187.1 MB)
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md5:b7fb3e0c2ae04be7622bb2f086923b08
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md5:d354bf9adf619a0ba2628971412ffe96
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577 Bytes | Download |
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md5:7388f1c5e9eda8a35c9fdd13a50e198a
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131.1 MB | Download |
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md5:21cefa0e8f2a00ffac0471a19bcb0f22
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5.1 MB | Download |
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md5:4501bbfa491a84f3fd3d0fd57af7a06b
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4.8 MB | Download |
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md5:d3043a8ded8d469d269439e9c6fbba87
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7.7 MB | Download |
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md5:c3cb0ead8e81bb58c05e9181259e18e5
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868.8 kB | Download |
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md5:1cf91eebbe6cba833d64759a4c32257a
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24.4 MB | Download |
Additional details
Related works
- Is cited by
- Journal article: 10.3389/fpls.2023.1248780 (DOI)