AstrobioMike/GToTree: GToTree v1.8.10

Published February 3, 2025 | Version v1.8.10

Software Open

saving ncbi downloaded files when debug flag (-d) is set as requested in https://github.com/AstrobioMike/GToTree/issues/95, implemented in https://github.com/AstrobioMike/GToTree/pull/102
- with the debug flag set while running, it will keep specific files in <output_dir>/<tmp_dir>/ncbi-downloads/:
  - if amino-acid seqs are used, it will keep the downloaded amino-acid seqs
  - if there were no amino-acid seqs, and the genome had to be downloaded, it will keep the downloaded genome and the prodigal-called amino-acid seqs
  - if using nucleotide mode (-z), it will keep the downloaded genome and the prodigal-called nt cds and amino-acid seqs

Files

Name	Size	Download all
AstrobioMike/GToTree-v1.8.10.zip md5:c621e3885c9a33f901adfdbe70ed1b44	164.3 kB	Preview Download

Is supplement to: Software: https://github.com/AstrobioMike/GToTree/tree/v1.8.10 (URL)