Published January 30, 2025
| Version v1
Dataset
Open
Dataset from InCell 2200 microscope misread as a plate
Authors/Creators
Description
Two dummy datasets are provided in this repository :
- Dataset_Ok : 96 wells, 9 fields of view per well, 4 different channels (DAPI, Cy3, FITC, Brightfield), no Z, no T. The .xcde file of this dataset is correctly read by BioFormats, as the dataset is recognized as a plate, and can be imported on OMERO
- Dataset_fail: 20 wells, 4 fields of view per well, 5 channels, with one duplicate (DAPI, FITC, Cy3, Cy5 wix 4 , Cy5 wix 5), no Z, no T. The .xcde file of this dataset is not correctly read by BioFormats and no images are imported on OMERO.
BioFormats version: 8.0.1
A discussion thread has been open on this topic.