WORKSHOP: RNAseq: reads to differential expression

This record includes training materials associated with the Australian BioCommons workshop ‘RNAseq: reads to differential expression’. This workshop took place on 10 - 11 September 2024.

Event description

RNA-Seq is a popular method for measuring differential gene expression. This hands-on workshop introduces the concepts of RNA-Seq analysis, from data preparation through to statistical testing for differential gene expression. You’ll learn how to use popular tools and workflows to analyse the data, produce graphical summaries and identify differentially expressed genes.

The workshop will focus on the use of Galaxy, a web-based platform for accessible, reproducible, and transparent computational biological research. Widely used by researchers world wide, Galaxy gives you access to 1000’s of popular tools for analysis and processing of biological data. Galaxy Australia is a fully subsidised service provided by Australian BioCommons. 

Lead trainer: Mike Thang, Galaxy Australia / QCIF

Facilitators: Dr Selene Fernandez Valverde, UNSW

Host: Dr Melissa Burke, Australian BioCommons.

Training materials

Materials are shared under a Creative Commons Attribution 4.0 International agreement unless otherwise specified and were current at the time of the event.

Files and materials included in this record:

• Event metadata (PDF): Information about the event including, description, event URL, learning objectives, prerequisites, technical requirements etc.

• Schedule (PDF): provides a breakdown of the timing of the session.

Materials shared elsewhere:

The workshop followed the Galaxy Training Network Tutorials:

• RNAseq: reads to counts

• RNAseq counts to genes