ElucidataInc/ElMaven: v0.5.0

Features

• PollyPhi (Fluxomics) integration through El-MAVEN–Polly interface
• CLI: Email Polly project on successful upload
• CLI: New argument for Polly project creation

Enhancements

• Persistent login in Polly dialog
• Fixed UI freeze while ongoing upload to Polly
• Create and upload sample cohort file to Polly
• Enable peak table deletion (#831)
• Warn user when compound from db is discarded, in CLI and GUI (#846)
• CLI: option to choose alignment algo (#691)
• CLI: Replaced firstview with fluxomics workflow
• CLI: Warn user if no db provided with targeted detection (#847)
• CLI: Warning when db is empty

Bug Fixes

• Error handling in El-Maven-Polly Integration
• Fixed SRM ID clustering – start and end qualifiers (#116)
• Fixed always positive charge for EI ionization type (#841)
• Export all labels detected in a peak table to CSV (#882)
• Fixed crash with empty lines in compound db in CLI and GUI

Refactors

• PollyElMavenInterfaceDialog and PollyIntegration
• TableDockWidget

Other

• UI: Removed "Save As" button from sample widget
• UI: Hide feedback button (#806)
• Fixed precision for CSV export values
• Set default isotope label option to be C13 only
• Added a sample credential file in installer

Beta Fixes

• Fixed fold change and p-value in scatterplot table