Published October 25, 2018
| Version v0.2.1
Software
Open
NCBI-Hackathons/phenotypeXpression: Batch Effects
Authors/Creators
- 1. NorthShore University HealthSystem
- 2. NCBI
Description
Updates:
- Batch effects are now checked in n samples, age of submissions and GPL platform type (all platforms are array types per geoprofiles restrictions)
- Batch effects saved in text file
- Bootstraps increased 1000 -> 5000 to improve reliabilty in clustering, costs about a minute of run time
- dpi on wordcloud increased to 80 -> 200
Files
NCBI-Hackathons/phenotypeXpression-v0.2.1.zip
Files
(6.6 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:442d45d4656bd0c49defa36e43d26fa3
|
6.6 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/NCBI-Hackathons/phenotypeXpression/tree/v0.2.1 (URL)