Published January 16, 2025
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Figure 3 from: Musker SD, Nürk NM, Pirie MD (2025) Maximising informativeness for target capture-based phylogenomics in Erica (Ericaceae). PhytoKeys 251: 87-118. https://doi.org/10.3897/phytokeys.251.136373
Authors/Creators
- 1. University of Cape Town, Cape Town, South Africa|University of Bayreuth, Bayreuth, Germany
- 2. University of Bayreuth, Bayreuth, Germany
- 3. The University of Bergen, Bergen, Norway
Description
Figure 3 Heatmap showing paralogy (P), the estimated proportion of a target's length covered by more than one assembled contig, for all samples and all loci in the Erica303 superset. Values of P were calculated from BLAST results using the actual target sequences. Targets and samples are arranged by mean P. This plot is a direct product of the TargetVet script VetHybPiper.sh.
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- Journal article: 10.3897/phytokeys.251.136373 (DOI)
- Journal article: https://zenodo.org/record/14684955 (URL)