Published December 23, 2024
| Version v9
Model
Open
MouseCHD Napari plugin
Description
MouseCHD is a pipeline for heart segmentation and detection of mouse congenital heart defects. This dataset include assets of MouseCHD project:
- assets.zip: a sample and thumbnail for MouseCHD Napari plugin
- HeartSeg.zip: heart segmentation models
- Classification.zip: classification models
- mousechd.sif: Apptainer image to run MouseCHD package
- mousechd-napari.sif: Apptainer image to run MouseCHD Napari plugin
Preprint: https://www.biorxiv.org/content/10.1101/2024.04.06.588383v1.abstract
Code: https://github.com/hnguyentt/MouseCHD
Plugin code: https://github.com/hnguyentt/mousechd-napari
Files
assets.zip
Files
(16.9 GB)
| Name | Size | Download all |
|---|---|---|
|
md5:61e07f600e48a348b2f25c39c32095ec
|
254.6 MB | Preview Download |
|
md5:2f9a6b1812429092a023b88c2f0db014
|
5.0 MB | Preview Download |
|
md5:1d8de9f97a23b736076356afbffc5b96
|
1.2 GB | Preview Download |
|
md5:77e724095c462be437e0f597483c3384
|
8.7 GB | Download |
|
md5:68a4f8b64465e07ead592f0b0b89122b
|
6.8 GB | Download |
Additional details
Software
- Repository URL
- https://github.com/hnguyentt/mousechd-napari
- Programming language
- Python
- Development Status
- Active