Published December 31, 2024 | Version v1
Dataset Open

Comparative population genomics unveils congruent secondary suture zone in Southwest Pacific Hydrothermal Vents

Authors/Creators

  • 1. ISEM, Univ Montpellier, CNRS, IRD, Montpellier, France
  • 2. MARBEC, Université de Montpellier, Ifremer, IRD, CNRS, Laboratory Environnements-Ressources Ifremer
  • 3. UMR 7144 AD2M CNRS-Sorbonne Université, Station Biologique de Roscoff, Place Georges Tessier, 29680 Roscoff, France
  • 4. UMR 8222 LECOB CNRS-Sorbonne Université, Observatoire Océanologique de Banyuls, 1 Avenue Pierre Fabre, 66650 Banyuls-sur-Mer, France

Description

Datasets (VCF files) used in "Comparative population genomics unveils congruent secondary suture zone in Southwest Pacific Hydrothermal Vents" 
 Tran Lu Y, A ., Ruault, S., Daguin-Thiébaut, C., Le Port, A., Ballenghien, M., Castel, J., Gagnaire, P., Bierne, N., Arnaud-Haond, S., Poitrimol, C., Thiébaut, E., Lallier, F., Broquet, T., Jollivet, D., Bonhomme, F., Hourdez, S.

Raw sequence reads (Individual fastq files) are available at the European Nucleotide Archive (bioproject PRJEB47533; Ifremeria nautilei) and the NCBI sequence read archive (PRJNA768636 for Alviniconcha kojimai;  PRJNA779874 for Lepetodrillus schrolli and aff schrolli; PRJNA772682 for Shinkailepas tollmanni;  PRJNA1044574 for Bathymodiolus manusensis; PRJNA1030156 for Eochionelasmus ohtai; PRJNA1044042 for Branchinotogluma segonzaci).

Metadata relative to the samples are also available with Biosamples accessions and linked to the sequence reads accession.

 

 

Notes (En)

See Description in Readme file

Files

README.txt

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Additional details

Funding

Agence Nationale de la Recherche
CERBERUS – ConnEctivity and Resilience of Back-arc Basin hydrothERmal vent commUnitieS ANR-17-CE02-0003