Fantasia Embeddings GOA2024

Database of UniProt Entries with Corresponding Embeddings

This database contains all UniProt entries and their corresponding embeddings, calculated using the following models:

• ProstT5
• ProtT5
• ESM2

The database is implemented in PostgreSQL and uses the pgvector extension to efficiently store and query high-dimensional embedding vectors. These embeddings are utilized in the FANTASIA pipeline to generate sequence annotations.