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Published October 9, 2018 | Version v1.0.0
Software Open

stajichlab/FGMP: FGMP release 1.0.0

Authors/Creators

  • 1. National Institutes of Health
  • 2. University of California-Riverside
  • 3. Plant & Food Research

Description

New release for FGMP paper and bioconda contribution. This release is tested on OSX and Linux (CentOS) requires these external dependancies:

  • Perl 5 (tested with the version 20)
  • BioPerl-1.6.924
  • HMMER v3.0 or later http://hmmer.janelia.org/
  • NCBI blastall (tested using version 2.2.31)
  • Exonerate (tested using version 2.2.0)
  • Augustus (tested using version 3.0.3) - should work with Augustus 3.2 and 3.3

Files

stajichlab/FGMP-v1.0.0.zip

Files (95.6 MB)

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md5:e3a65233255167a8d1ed6383d007fbba
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Additional details

Related works

Is supplement to
https://github.com/stajichlab/FGMP/tree/v1.0.0 (URL)