Published December 18, 2024 | Version v1
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concatenated phi6 genome

  • 1. ROR icon Rutgers, The State University of New Jersey
  • 2. ROR icon University of Oxford

Description

Cystovirus phi6, a bacteriophage that infects Pseudomonas bacteria, has a genome of three dsRNA segments: small (S), medium (M) and large (L).  This is a reference genome of the Duffy Lab wildtype strain (derived from ATCC 21781-B1), with the three segments concatenated to make a continuous genome. The length of the concatenated genome is 13,388 nt, with the S segment occupying 1- 2949, the M segment occupying 2950 - 7014 and the L segment occupying 7015 - 13388.  Note that the L segment is the same length as the NCBI reference sequence for Cystovirus phi6 (NC_003715), but the S and M segments of this phi6 strain are one base (S segment) and two bases (M segment) longer than the corresponding reference sequences (NC_003714, NC_003716).

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Additional details

Funding

U.S. National Science Foundation
CAREER: The evolutionary genetics of constraint and evolvability in an RNA bacteriophage 1453241