Published December 16, 2024
| Version v2.6.4
Software
Open
RENEE: Rna sEquencing aNalysis pipElinE
Authors/Creators
- 1. Advanced Biomedical Computational Science, Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA
Description
- Fix spelling of shared SIF directory on biowulf -- it is
/data/CCBR_Pipeliner/SIFswith a lowercase "s" at the end. (#182, @kelly-sovacool) - Raise an error if too few reads are left after trimming with cutadapt. (#184, @kelly-sovacool)
- Reformat GTF files during
renee buildthat are missing 'gene_biotype' or 'gene_type' attributes in exons. (#185, @kelly-sovacool) - Add support for the marmoset genome (mCalJac1 2021). (#185, @kelly-sovacool)
Notes
Please cite RENEE as below.
Files
CCBR/RENEE-v2.6.4.zip
Files
(11.1 MB)
| Name | Size | Download all |
|---|---|---|
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md5:40961a3154153cc534f0fc7f3757e2a4
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Additional details
Related works
- Is supplement to
- Software: https://github.com/CCBR/RENEE/tree/v2.6.4 (URL)
Software
- Repository URL
- https://github.com/CCBR/RENEE