AutoGaitA - Automated Gait Analysis in Python

Published December 13, 2024 | Version v1.0.0

Software Open

Major code refactoring
Added AutoGaitA SLEAP
AutoGaitA Simi has been changed to AutoGaitA Universal 3D
- Including a "Datafile Preparation" part that makes it universal
Major Improvements to PCA
- Cycle bins can be chosen so PCA is only performed over those instead of over full cycle
- Number of PCs can be chosen via percentage explained variance
- Custom Scatterplots can be configured
- Top features going into each PC provided as Excel table
- ID x PC value Excel table provided for recognising IDs in scatterplots
Major improvements to Tukey's & ANOVA
- 1 way ANOVA if only 1 within factor
- Always running Tukeys irrespective of ANOVA results
- Always printing & storing ANOVA tables
- Saving Multiple Comparison Results as two versions, one sheet for each feature
Ensuring that simi would work if IDs were just a number, e.g. just 1
Fixed an issue in dlc gui where the "wrong trial number" error would break the GUI instead of showing a message-window to users
Added an error message if dlc's step cycle latency extraction should break because of wrong Annotation Table swing/stance column names
Fixed not checking for user-missed underscore "_" in camera identifier in dlc gaita
Fixed an issue in plot_velocities in group where some random group's number instead of joint name was included in the title
Fixed assuming metres in universal3D velocity & acceleration plots

Notes

If you use this software, please cite our preprint.

Name	Size	Download all
mahan-hosseini/AutoGaitA-v1.0.0.zip md5:0108be765fa921785a03dc2b61956c8b	237.2 MB	Preview Download

Is supplement to: Software: https://github.com/mahan-hosseini/AutoGaitA/tree/v1.0.0 (URL)