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Published November 20, 2024 | Version v1
Dataset Open

CellBinDB: A Large-Scale Multimodal Annotated Dataset

Creators

  • 1. ROR icon BGI Research

Description

CellBinDB is a large-scale, multimodal annotated dataset for cell segmentation. It contains 1,044 annotated microscope images and 109,083 cell annotations, covering four staining types: DAPI, ssDNA, H&E, and mIF. CellBinDB contains samples from two species, human and mouse, covering more than 30 histologically different tissue types, including disease-related tissues. The images in CellBinDB come from two sources: 844 mouse images from internal experiments and 200 human images from the open access platform 10x Genomics. We annotated all images in CellBinDB and provide two types of image annotations: semantic and instance masks. A xlsx file is attached to record the detailed information of each image.

Files

CellBinDB.zip

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Additional details

Related works

Is published in
Preprint: 10.1101/2024.11.20.619750 (DOI)
Dataset: 10.26036/CNP0006370 (DOI)