Published December 3, 2024 | Version v1

Four new species of Phanerochaete (Polyporales, Basidiomycota) from China

  • 1. Beijing Forestry University, Beijing, China

Description

Four new wood-inhabiting fungi viz. Phanerochaete castanea, P. citrinoalba, P. citrinorhizomorpha, and P. wuyiensis spp. nov. – are proposed based on a combination of morphological features and molecular evidence. Phanerochaete castanea is characterized by soft coriaceous basidiomata detachable from the substrate, becoming reddish brown in KOH, subulate cystidia with an obtuse apex. Phanerochaete citrinoalba is characterized by the coriaceous basidiomata with smooth, cracking hymenial surface, sterile margins with yellowish to whitish rhizomorphs, a monomitic hyphal system, generative hyphae mostly with simple septa and occasionally with clamp connections at basal hyphae. Phanerochaete citrinorhizomorpha is characterized by soft coriaceous basidiomata with a salmon to peach hymenial surface, a sterile margin with yellowish rhizomorphs, simple septate generative hyphae, and clavate to subfusiform or subulate cystidia with an obtuse apex. Phanerochaete wuyiensis is characterized by membranaceous basidiomata with smooth or locally tuberculate hymenial surface and the whitish rhizomorphs, generative hyphae with both simple septa and clamp connections at basal hyphae, cystidia projecting above hymenium. DNA sequences of the ITS and LSU markers of the studied samples were generated, and phylogenetic analyses were performed with Maximum Likelihood and Bayesian Inference methods. The phylogenetic tree inferred from the concatenated ITS+nLSU dataset highlighted the placement of the four new species in the genus Phanerochaete (Phanerochaetaceae, Polyporales). Phylogenetically related and morphologically similar species to these four new species are discussed. Furthermore, an identification key to accepted species of Phanerochaete in China is given.

Files

MC_article_133093.pdf

Files (11.7 MB)

Name Size Download all
md5:ae5cbf582767111124d283de55724e64
11.7 MB Preview Download

System files (310.0 kB)

Name Size Download all
md5:c875d419108c17f66ca6b46ee90c6178
310.0 kB Download

Linked records

Additional details

References

  • Anonymous (1969) Flora of British fungi. Colour identification chart. Her Majesty's Stationery Office, London.
  • Bernicchia A, Gorjón SP (2010) Fungi Europaei 12: Corticiaceae s.l. Edizioni Candusso, Alassio, Italy.
  • Binder M, Justo A, Riley R, Salamov A, Lopez-Giraldes F, Sjökvist E et al. (2013) Phylogenetic and phylogenomic overview of the Polyporales. Mycologia 105(6): 1350–1373. https://doi.org/10.3852/13-003
  • Boonmee S, Wanasinghe DN, Calabon MS, Huanraluek N, Chandrasiri SKU, Jones GEB, Rossi W, Leonardi M, Singh SK, Rana S, Singh PN, Maurya DK, Lagashetti AC, Choudhary D, Dai Y-C, Zhao C-L, Mu Y-H, Yuan H-S, He S-H, Phookamsak R, Jiang H-B, Martín MP, Dueñas M, Telleria MT, Kałucka IL, Jagodziński AM, Liimatainen K, Pereira DS, Phillips AJL, Suwannarach N, Kumla J, Khuna S, Lumyong S, Potter TB, Shivas RG, Sparks AH, Vaghefi N, Abdel-Wahab MA, Abdel-Aziz FA, Li G-J, Lin W-F, Singh U, Bhatt RP, Lee HB, Nguyen TTT, Kirk PM, Dutta AK, Acharya K, Sarma VV, Niranjan M, Rajeshkumar KC, Ashtekar N, Lad S, Wijayawardene NN, Bhat DJ, Xu R-J, Wijesinghe SN, Shen H-W, Luo Z-L, Zhang J-Y, Sysouphanthong P, Thongklang N, Bao D-F, Aluthmuhandiram JVS, Abdollahzadeh J, Javadi A, Dovana F, Usman M, Khalid AN, Dissanayake AJ, Telagathoti A, Probst M, Peintner U, Garrido-Benavent I, Bóna L, Merényi Z, Boros L, Zoltán B, Stielow JB, Jiang N, Tian C-M, Shams E, Dehghanizadeh F, Pordel A, Javan-Nikkhah M, Denchev TT, Denchev CM, Kemler M, Begerow D, Deng C-Y, Harrower E, Bozorov T, Kholmuradova T, Gafforov Y, Abdurazakov A, Xu J-C, Mortimer PE, Ren G-C, Jeewon R, Maharachchikumbura SSN, Phukhamsakda C, Mapook A, Hyde KD (2021) Fungal diversity notes 1387–1511: Taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Diversity 111(1): 1–335. https://doi.org/10.1007/s13225-021-00489-3
  • Burdsall HH (1985) A contribution to the taxonomy of the genus Phanerochaete. Mycologia Memoir 10: 1–165. https://doi.org/10.1002/jobm.3620280804
  • Capella-Gutierrez S, Silla-Martinez JM, Gabaldon T (2009) trimAl: A tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics (Oxford, England) 25(15): 1972–1973. https://doi.org/10.1093/bioinformatics/btp348
  • Chen CC, Wu SH, Chen CY (2018) Hydnophanerochaete and Odontoefibula, two new genera of phanerochaetoid fungi (Polyporales, Basidiomycota) from East Asia. MycoKeys 39: 75–96. https://doi.org/10.3897/mycokeys.39.28010
  • Chen CC, Chen CY, Wu SH (2021) Species diversity, taxonomy and multi-gene phylogeny of phlebioid clade (Phanerochaetaceae, Irpicaceae, Meruliaceae) of Polyporales. Fungal Diversity 111(1): 337–442. https://doi.org/10.1007/s13225-021-00490-w
  • Cui BK, Li HJ, Ji X, Zhou JL, Song J, Si J, Yang Z-L, Dai Y-C (2019) Species diversity, taxonomy and phylogeny of Polyporaceae (Basidiomycota) in China. Fungal Diversity 97(1): 137–392. https://doi.org/10.1007/s13225-019-00427-4
  • Dai YC, Yang ZL, Cui BK, Wu G, Yuan HS, Zhou LW et al. (2021) Diversity and systematics of the important macrofungi in Chinese forests. Junwu Xuebao 40: 770–805.
  • Deng YL, Li JF, Zhao CL, Zhao J (2024) Four new fungal species in forest ecological system from Southwestern China. Journal of Fungi (Basel, Switzerland) 10(3): 194. https://doi.org/10.3390/jof10030194
  • Eriksson J, Hjortstam K, Ryvarden L (1978) The Corticiaceae of North Europe 5 Mycoaciella-Phanerochaete. Fungiflora, Oslo, Norway, 887–1047.
  • Floudas D, Hibbett DS (2015) Revisiting the taxonomy of Phanerochaete (Polyporales, Basidiomycota) using a four gene dataset and extensive ITS sampling. Fungal Biology 119(8): 679–719. https://doi.org/10.1016/j.funbio.2015.04.003
  • Ghobad-Nejhad M, Liu SL, Langer E, Dai YC (2015) Molecular and morphological evidence reveal a new non-cystidiate species belonging to the core Phanerochaete (Polyporales). Mycological Progress 14(9): 68. https://doi.org/10.1007/s11557-015-1072-9
  • Greslebin A, Nakasone KK, Rajchenberg M (2004) Rhizochaete, a new genus of phanerochaetoid fungi. Mycologia 96(2): 260–271. https://doi.org/10.1080/15572536.2005.11832976
  • Han ML, Vlasák J, Cui BK (2015) Daedalea americana sp. nov. (Polyporales, Basidiomycota) evidenced by morphological characters and phylogenetic analysis. Phytotaxa 204(4): 277–286. https://doi.org/10.11646/phytotaxa.204.4.4
  • Hopple Jr JS, Vilgalys R (1999) Phylogenetic relationships in the mushroom genus Coprinus and dark-spored allies based on sequence data from the nuclear gene coding for the large ribosomal subunit RNA: Divergent domains, outgroups, and monophyly. Molecular Phylogenetics and Evolution 13(1): 1–19. https://doi.org/10.1006/mpev.1999.0634
  • Justo A, Miettinen O, Floudas D, Ortiz-Santana B, Sjökvist E, Lindner D, Nakasone K, Niemelä T, Larsson K-H, Ryvarden L, Hibbett DS (2017) A revised family-level classification of the Polyporales (Basidiomycota). Fungal Biology 121(9): 798–824. https://doi.org/10.1016/j.funbio.2017.05.010
  • Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: Improvements in performance and usability. Molecular Biology and Evolution 30(4): 772–780. https://doi.org/10.1093/molbev/mst010
  • Larsson KH (2007) Re-thinking the classification of corticioid fungi. Mycological Research 111(9): 1040–1063. https://doi.org/10.1016/j.mycres.2007.08.001
  • Larsson A (2014) AliView: A fast and lightweight alignment viewer and editor for large data sets. Bioinformatics (Oxford, England) 30(22): 3276–3278. https://doi.org/10.1093/bioinformatics/btu531
  • Larsson KH, Larsson E, Kõljalg U (2004) High phylogenetic diversity among corticioid homobasidiomycetes. Mycological Research 108(9): 983–1002. https://doi.org/10.1017/S0953756204000851
  • Li Y, Chen CC, He SH (2023) New corticioid taxa in Phanerochaetaceae (Polyporales, Basidiomycota) from East Asia. Frontiers in Microbiology 14: 1093096. https://doi.org/10.3389/fmicb.2023.1093096
  • Liu SL, He SH (2016) Phanerochaete porostereoides, a new species in the core clade withbrown generative hyphae from China. Mycosphere: Journal of Fungal Biology 7(5): 648–655. https://doi.org/10.5943/mycosphere/7/5/10
  • Maddison WP, Maddison DR (2017) . Mesquite: A Modular System for Evolutionary Analysis, Version 3.2. http://mesquiteproject.org
  • Miettinen O, Spirin V, Vlasak J, Rivoire B, Stenroos S, Hibbett D (2016) Polypores and genus concepts in Phanerochaetaceae (Polyporales, Basidiomycota). MycoKeys 17: 1–46. https://doi.org/10.3897/mycokeys.17.10153
  • Miller MA, Pfeiffer W, Schwartz T (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop (GCE), New Orleans, LA, 1–8. https://doi.org/10.1109/GCE.2010.5676129
  • Nagy LG, Riley R, Bergmann PJ, Krizsán K, Martin FM, Grigoriev IV, Cullen D, Hibbett DS (2017) Genetic bases of fungal white rot wood decay predicted by phylogenomic analysis of correlated gene-phenotype evolution. Molecular Biology and Evolution 34(1): 35–44. https://doi.org/10.1093/molbev/msw238
  • Ordynets A, Scherf D, Pansegrau F, Denecke J, Lysenko L, Larsson KH, Langer E (2018) Short-spored Subulicystidium (Trechisporales, Basidiomycota): High morphological diversity and only partly clear species boundaries. MycoKeys 35: 41–99. https://doi.org/10.3897/mycokeys.35.25678
  • Parmasto E (1967) Corticiaceae U.R.S.S. IV. Descriptiones taxorum novarum. Combinationes novae. Eesti NSV Teaduste Akadeemia Toimetised 16: 377–394.
  • Petersen JH (1996) The Danish Mycological Society's colour-chart. Foreningen til Svampekundskabens Fremme, Greve.
  • Phookamsak R, Hyde KD, Jeewon R, Bhat DJ, Jones EBG, Maharachchikumbura S, Raspé O, Karunarathna SC, Wanasinghe DN, Hongsanan S, Doilom M, Tennakoon DS, Machado AR, Firmino AL, Ghosh A, Karunarathna A, Mešić A, Dutta AK, Thongbai B, Devadatha B, Norphanphoun C, Senwanna C, Wei D, Pem D, Ackah FK, Wang G-N, Jiang H-B, Madrid H, Lee HB, Goonasekara ID, Manawasinghe IS, Kušan I, Cano J, Gené J, Li J, Das K, Acharya K, Raj KNA, Latha KPD, Chethana KWT, He M-Q, Dueñas M, Jadan M, Martín MP, Samarakoon MC, Dayarathne MC, Raza M, Park MS, Telleria MT, Chaiwan N, Matočec N, de Silva NI, Pereira OL, Singh PN, Manimohan P, Uniyal P, Shang Q-J, Bhatt RP, Perera RH, Alvarenga RLM, Nogal-Prata S, Singh SK, Vadthanarat S, Oh S-Y, Huang S-K, Rana S, Konta S, Paloi S, Jayasiri SC, Jeon SJ, Mehmood T, Gibertoni TB, Nguyen TTT, Singh U, Thiyagaraja V, Sarma VV, Dong W, Yu X-D, Lu Y-Z, Lim YW, Chen Y, Tkalčec Z, Zhang Z-F, Luo Z-L, Daranagama DA, Thambugala KM, Tibpromma S, Camporesi E, Bulgakov TS, Dissanayake AJ, Senanayake IC, Dai DQ, Tang L-Z, Khan S, Zhang H, Promputtha I, Cai L, Chomnunti P, Zhao R-L, Lumyong S, Boonmee S, Wen T-C, Mortimer PE, Xu J (2019) Fungal diversity notes 929–1035: Taxonomic and phylogenetic contributions on genera and species of fungi. Fungal Diversity 95(1): 1–273. https://doi.org/10.1007/s13225-019-00421-w
  • Ronquist F, Huelsenbeck JP (2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics (Oxford, England) 19(12): 1572–1574. https://doi.org/10.1093/bioinformatics/btg180
  • Ryvarden L, Melo I (2014) Poroid fungi of Europe. Synop Fungorum 31: 1–455.
  • Sayers EW, Cavanaugh M, Clark K, Pruitt KD, Sherry ST, Yankie L, Karsch-Mizrachi I (2024) GenBank 2024 Update. Nucleic Acids Research 52(5): 134–137. https://doi.org/10.1093/nar/gkad903
  • Shen LL, Wang M, Zhou JL, Xing JH, Cui BK, Dai YC (2019) Multi-gene phylogeny and taxonomy of the brown-rot fungi: Postia (Polyporales, Basidiomycota) and related genera. Persoonia 42(1): 101–126. https://doi.org/10.3767/persoonia.2019.42.05
  • Spirin V, Volobuev S, Okun M, Miettinen O, Larsson KH (2017) What is the type species of Phanerochaete (Polyporales, Basidiomycota)? Mycological Progress 16(2): 171–183. https://doi.org/10.1007/s11557-016-1267-8
  • Sun YF, Costa-Rezende DH, Xing JH, Zhou JL, Zhang B, Gibertoni TB, Gates G, Glen M, Dai Y-C, Cui B-K (2020) Multi-gene phylogeny and taxonomy of Amauroderma s.lat. (Ganodermataceae). Persoonia 44(1): 206–239. https://doi.org/10.3767/persoonia.2020.44.08
  • Volobuev S, Okun M, Ordynets A, Spirin V (2015) The Phanerochaete sordida group (Polyporales, Basidiomycota) in temperate Eurasia, with a note on Phanerochaete pallida. Mycological Progress 14(10): 80. https://doi.org/10.1007/s11557-015-1097-0
  • Wang DQ, Zhao CL (2021) Morphological and phylogenetic evidence for recognition of two new species of Phanerochaete from East Asia. Journal of Fungi (Basel, Switzerland) 7(12): 1063. https://doi.org/10.3390/jof7121063
  • White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White JT (Eds) PCR Protocols: A guide to methods and applications. Academic Press, San Diego, 315–322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
  • Wu SH (2000) Six new species of Phanerochaete from Taiwan. Botanical Bulletin of Academia Sinica (Taipei) 41: 165–174.
  • Wu SH, Nilsson HR, Chen CT, Yu SY, Hallenberg N (2010) The white-rotting genus Phanerochaete is polyphyletic and distributed throughout the phleboid clade of the Polyporales (Basidiomycota). Fungal Diversity 42(1): 107–118. https://doi.org/10.1007/s13225-010-0031-7
  • Wu SH, Chen CC, Wei CL (2018) Three new species of Phanerochaete (Polyporales, Basidiomycota). MycoKeys 41: 91–106. https://doi.org/10.3897/mycokeys.41.29070
  • Wu F, Man XW, Tohtirjap A, Dai YC (2022a) A comparison of polypore funga and species composition in forest ecosystems of China, North America, and Europe. Forest Ecosystems 9: 100051. https://doi.org/10.1016/j.fecs.2022.100051
  • Wu F, Zhou LW, Vlasák J, Dai YC (2022b) Global diversity and systematics of Hymenochaetaceae with poroid hymenophore. Fungal Diversity 113(1): 1–192. https://doi.org/10.1007/s13225-021-00496-4
  • Xu YL, Cao YF, Nakasone KK, Chen CC, He SH (2020) Taxonomy and phylogeny of Phanerochaete sensu stricto (Polyporales, Basidiomycota) with emphasis on Chinese collections and descriptions of nine new species. Mycosphere: Journal of Fungal Biology 11(1): 1527–1552. https://doi.org/10.5943/mycosphere/11/1/12
  • Yu J, Cai J, Liu HG, Zhao CL (2023) Molecular systematics and taxonomy reveal three new taxa in Phanerochaete (Phanerochaetaceae, Polyporales) from the Yunnan–Guizhou plateau, East Asia. Mycological Progress 22(8): 59. https://doi.org/10.1007/s11557-023-01903-7
  • Yuan Y, Bian LS, Wu YD, Chen JJ, Wu F, Liu HG, Zeng G-Y, Dai Y-C (2023) Species diversity of pathogenic wood-rotting fungi (Agaricomycetes, Basidiomycota) in China. Mycology 14(3): 204–226. https://doi.org/10.1080/21501203.2023.2238779
  • Zhang QY, Liu ZB, Liu HG, Si J (2023) Two new corticioid species of Phanerochaetaceae (Polyporales, Basidiomycota) from Southwest China. Frontiers in Cellular and Infection Microbiology 13: 1105918. https://doi.org/10.3389/fcimb.2023.1105918
  • Zhao H, Wu YD, Yang ZR, Liu HG, Wu F, Dai YC, Yuan Y (2024) Polypore funga and species diversity in tropical forest ecosystems of Africa, America and Asia, and a comparison with temperate and boreal regions of the Northern Hemisphere. Forest Ecosystems 11: 100200. https://doi.org/10.1016/j.fecs.2024.100200
  • Zhou M, Dai YC, Vlasák J, Liu HG, Yuan Y (2023) Updated systematics of Trichaptum s.l. (Hymenochaetales, Basidiomycota). Mycosphere: Journal of Fungal Biology 14(1): 815–917. https://doi.org/10.5943/mycosphere/14/1/11
  • Zhu L, Song J, Zhou JL, Si J, Cui BK (2019) Species diversity, phylogeny, divergence time and biogeography of the genus Sanghuangporus (Basidiomycota). Frontiers in Microbiology 10: 812. https://doi.org/10.3389/fmicb.2019.00812