Published November 25, 2024
| Version v0.31.0
Software
Open
Snk: A Snakemake CLI and Workflow Management System
Authors/Creators
Description
Snk (pronounced "snek") is a workflow management tool designed to simplify the use of Snakemake workflows by dynamically generating command-line interfaces (CLIs). Snk allows complex Snakemake workflows to be used as modular components in larger systems that can be executed and managed from the command line with minimal overhead. This enables researchers and developers to integrate and manage sophisticated workflows seamlessly. Snk significantly improves the interoperability and accessibility of Snakemake workflows, making it easier to use and share computational pipelines in various research fields.
Files
snk-cli-joss-publication-release.zip
Additional details
Software
- Repository URL
- https://github.com/Wytamma/snk
- Development Status
- Active