Published September 17, 2018
| Version v0.5.0
Software
Open
BaderLab/scClustViz: Modular DE testing functions
Description
Refactored the DE testing function so that it is made up of modular components, allowing it to be incorporated into existing analysis pipelines. Now there's a function to test DE at a single resolution, so that you can test resolutions as you iterate through them during clustering analysis (see example on webpage - https://baderlab.github.io/scClustViz/#scrnaseq-analysis-pipeline). Each step of the DE testing is also modular, so you can swap in your DE test of choice.
Files
BaderLab/scClustViz-v0.5.0.zip
Files
(745.0 kB)
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Additional details
Related works
- Is supplement to
- https://github.com/BaderLab/scClustViz/tree/v0.5.0 (URL)