Published November 17, 2024 | Version v3
Software documentation Open

Large Language Models for Extraction of Structured Data in Pathology

  • 1. ROR icon University Hospital Cologne

Description

This repository contains a comprehensive suite of scripts designed to extract, process, analyze, and visualize structured data from pathology reports. The workflow utilizes various models and APIs, including OpenAI's GPT-4, Hugging Face's LLaMA models, and 4-bit quantized model versions provided by Ollama. Additionally, R scripts are provided for detailed statistical analysis and visualization of the extracted data.

Files

README.pdf

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Additional details

Dates

Available
2024-11-17