Published November 11, 2024
| Version 0.3.0-prerelease-2024-11-11
Software
Open
SCimilarity API
Authors/Creators
-
1.
Genentech
- 2. Genentech, Inc
- 3. F. Hoffmann-La Roche, Ltd.
- 4. Genentech, Inc.
-
5.
Genetech (Sri Lanka)
Description
SCimilarity is a unifying representation of single-cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training. This enables a novel cell search capability, which sifts through millions of profiles to find cells similar to a query cell state and allows researchers to quickly and systematically leverage massive public scRNA-seq atlases to learn about a cell state of interest.
This repository includes snapshots release/prerelease SCimilarity API, documentation, and containerization code.
Files
Files
(7.6 MB)
| Name | Size | Download all |
|---|---|---|
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md5:2b10962f2660b9ecf75d163261d7e6b9
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7.6 MB | Download |
Additional details
Related works
- Is published in
- Journal article: 10.1101/2023.07.18.549537 (DOI)
Software
- Repository URL
- https://github.com/Genentech/scimilarity
- Programming language
- Python
- Development Status
- Active