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Published October 18, 2024 | Version 1.2
Dataset Open

GARNET Database

Authors/Creators

  • 1. ROR icon University of California, Berkeley

Description

This repository contains all data described in our recent manuscript:

Yekaterina Shulgina*, Marena I. Trinidad*, Conner J. Langeberg*, Hunter Nisonoff*, Seyone Chithrananda*, Petr Skopintsev*, Amos J. Nissley*, Jaymin Patel, Ron S. Boger, Honglue Shi, Peter H. Yoon, Erin E Doherty, Tara Pande, Aditya M. Iyer, Jennifer A. Doudna, Jamie H. D. Cate*. RNA language models predict mutations that improve RNA function. bioRxiv 2024.04.05.588317; doi: https://doi.org/10.1101/2024.04.05.588317

* Contributed equally

Descriptions of all files are available in the enclosed README.md. Associated code for the manuscript is located here: https://github.com/Doudna-lab/GARNET_DL

Files

GARNET_Database.zip

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Additional details

Related works

Is published in
Dataset: 38617247 (PMID)

Dates

Available
2024-10-28

Software

Repository URL
https://github.com/Doudna-lab/GARNET_DL
Programming language
Python
Development Status
Active