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Published October 22, 2024 | Version 3.5.2
Software Open

CFIA-NCFAD/nf-flu: 3.5.2

Authors/Creators

  • 1. Canadian Food Inspection Agency
  • 2. Public Health Agency of Canada

Description

This patch release fixes a few issues when running the pipeline.

Changes

  • fix: better handling of empty IRMA consensus sequences to avoid downstream analysis errors with VADR and BLASTN (peterk87/nf-flu #22)
  • fix: Clair3 versions.yml indentation issue (#87)
  • fix: removed capturing of cat and gzip versions in CAT_ILLUMINA_FASTQ process (#46) to avoid issue in some execution environments.
  • docs: update README.md

What's Changed

  • Fix multiple issues by @peterk87 in https://github.com/CFIA-NCFAD/nf-flu/pull/88
  • Release 3.5.2 by @peterk87 in https://github.com/CFIA-NCFAD/nf-flu/pull/89

Full Changelog: https://github.com/CFIA-NCFAD/nf-flu/compare/3.5.1...3.5.2

Files

CFIA-NCFAD/nf-flu-3.5.2.zip

Files (2.9 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/CFIA-NCFAD/nf-flu/tree/3.5.2 (URL)