Supplementary Tables on Gene Annotations of 49 Bacillariophyta Genome Assemblies

Supplementary Tables attaining to the manuscript entitled Annotation of protein-coding genes in 49 diatom genomes from the Bacillariophyta clade. These Supplementary Tables describe in part the data foundation and results of the actual annotation dataset that is available at https://doi.org/10.5281/zenodo.13767023.

Supplementary Table S1: Genome assemblies available at NCBI Datasets in June 2024.

Supplementary Table S2: Genome assemblies excluded from annotation.

Supplementary Table S3: Accession numbers of genome assemblies and RNAseq libraries used for annotating 49 diatom genomes. Table also lists repeat content of genome assemblies after masking with RepeatModeler2/RepeatMasker.

Supplementary Table S4: Software and container versions used for annotating 49 diatom genomes.

Supplementary Table S5: Summary of EnTAP functional annotation results. The actual functional annotations are included in the annotation dataset that is available at https://doi.org/10.5281/zenodo.13767023.