Published July 31, 2026 | Version r20260730
Software Open

neuropoly/totalspineseg: TotalSpineSeg-r20260730

Authors/Creators

  • 1. University College London
  • 2. Polytechnique Montreal
  • 3. @NeuroPoly
  • 4. @neuropoly

Description

TotalSpineSeg-r20260730

What's Changed

  • Fix labeling issue by @NathanMolinier in https://github.com/neuropoly/totalspineseg/pull/127
  • Update totalspineseg version by @NathanMolinier in https://github.com/neuropoly/totalspineseg/pull/128
  • Consider landmark if bigger than min_component_size by @NathanMolinier in https://github.com/neuropoly/totalspineseg/pull/132
  • Update version by @NathanMolinier in https://github.com/neuropoly/totalspineseg/pull/133
  • Reduce minimum component size to 200 by @NathanMolinier in https://github.com/neuropoly/totalspineseg/pull/134
  • Add preprint badge and move reference to the top by @NathanMolinier in https://github.com/neuropoly/totalspineseg/pull/135
  • Interrupt processing if step1 fails by @NathanMolinier in https://github.com/neuropoly/totalspineseg/pull/137
  • Move device setup outside of inference by @NathanMolinier in https://github.com/neuropoly/totalspineseg/pull/142
  • Update version to 20260623 by @NathanMolinier in https://github.com/neuropoly/totalspineseg/pull/143
  • new nnUNetV2 weights trained using AugLab-r20260615 and elastic deformation data augmentation to make TotalSpineSeg more robust to pathologies such as scoliosis, spinal canal/cord compression.

Full Changelog: https://github.com/neuropoly/totalspineseg/compare/r20251124...r20260730

Files

neuropoly/totalspineseg-r20260730.zip

Files (132.9 kB)

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Additional details

Related works

Is supplement to
Software: https://github.com/neuropoly/totalspineseg/tree/r20260730 (URL)

Software

Repository URL
https://github.com/neuropoly/totalspineseg