Published November 3, 2023
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Table 2 in A revised taxonomy and phylogeny of opalinids (Stramenopiles: Opalinata) inferred from the analysis of complete nuclear ribosomal DNA genes
Authors/Creators
- 1. State Key Laboratory of Freshwater Ecology and Biotechnology * and Key Laboratory of Aquaculture Disease Control * Ministry of Agriculture * Institute of Hydrobiology * Chinese Academy of Sciences * Wuhan 430072 * China
- 2. State Key Laboratory of Freshwater Ecology and Biotechnology * and Key Laboratory of Aquaculture Disease Control * Ministry of Agriculture * Institute of Hydrobiology * Chinese Academy of Sciences * Wuhan 430072 * China & College of Advanced Agricultural Sciences * University of Chinese Academy of Sciences * Beijing 100049 * China
- 3. Departamento de Microbiología y Parasitología * Facultad de Farmacia * Universidad Complutense de Madrid * Plaza Ramón y Cajal s / n * Madrid 28040 * Spain
Description
Table 2. Primers used for PCRs and sequencing (F* forward; R* reverse).
| Primer | Sequence | Reference |
|---|---|---|
| MedlinA (F) | 5 ʹ -AACCTGGTTGATCCTGCCAGT-3% | Medlin et al. (1988) |
| MedlinB (R) | 5 ʹ -TGATCCTTCTGCAGGTTCACCTAC-3% | Medlin et al. (1988) |
| SSU-LSU-F (F) | 5 ʹ -TCGCACCTACCGATTGGATG-3% | This study |
| SSU-LSU-R (R) | 5 ʹ -GAAAAGATAACTCTTCCTAG-3% | This study |
| M28S-F (F) | 5 ʹ -TAGCCCTGAAAATGGATGGCGCT-3% | This study |
| 28S-4R (R) | 5 ʹ -TTCTGACTTAGAGGCGTTCAG-3% | Moreira et al. (2007) |
Notes
Published as part of Li, Ming, Hu, Guangran, Zhao, Weishan, Zou, Hong, Li, Wenxiang, Wu, Shangong, Wang, Guitang & Ponce-Gordo, Francisco, 2024, A revised taxonomy and phylogeny of opalinids (Stramenopiles: Opalinata) inferred from the analysis of complete nuclear ribosomal DNA genes, pp. 271 in Zoological Journal of the Linnean Society 201 (2) on page 271, DOI: 10.1093/zoolinnean/zlad150, http://zenodo.org/record/13220219
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Related works
- Is part of
- Journal article: 10.1093/zoolinnean/zlad150 (DOI)
- Journal article: urn:lsid:plazi.org:pub:FFF4FFFA75649466F0042747FFB36E6E (LSID)
- Journal article: http://zenodo.org/record/13220219 (URL)
- Journal article: http://publication.plazi.org/id/FFF4FFFA75649466F0042747FFB36E6E (URL)
- Journal article: http://zoobank.org/672E17B-149D-466C-9A6E-26C6DD65A7B6Corresponding (URL)
References
- Medlin LK * Elwood HJ * Stickel S et al. The characterization of enzymatically amplified 16 S-like rRNA coding regions. Gene 1988; 71: 491 - 9.
- Moreira D * von der Heyden S * Bass D et al. Global eukaryote phylogeny: combined small- and large-subunit ribosomal DNA trees support monophyly of Rhizaria * Retaria and Excavata. Molecular Phylogenetics and Evolution 2007; 44: 255 - 66.