Published September 26, 2024
| Version v1
Poster
Open
ntRoot: Scalable Ancestry Predictions from Genome Sequencing Data
Authors/Creators
Contributors
Researcher (4):
Description
We present ntRoot, an alignment-free and computationally lightweight framework for inferring human super-population-level global and local ancestry from whole genome assemblies or raw sequencing data types, and demonstrate its utility on over 300, Simon Genome Diversity Project and 1000 Genomes Project datasets. ntRoot is available from https://github.com/bcgsc/ntRoot. A preprint describing the technology is accessible at https://doi.org/10.1101/2024.03.26.586646
Files
WarrenRL_PSB2025_NTROOT.pdf
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Additional details
Funding
- Canadian Institutes of Health Research
- Assembly and annotation of genomes, transcriptomes, and metagenomes PJT-183608