Published September 25, 2024
| Version v1
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Supplementary Files for "Proteomic analysis of the sponge Aggregation Factor implicates an ancient toolkit for allorecognition and adhesion in animals"
Authors/Creators
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1.
European Molecular Biology Laboratory
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2.
University of Denver
Description
This repository hosts supplemental files for the Manuscript "Proteomic analysis of the sponge Aggregation Factor implicates an ancient toolkit for allorecognition and adhesion in animals" by Ruperti, et al., 2024.
- Suppl_File_wreath_domain_model.pdb: AlphaFold3 model for the C. prolifera MAFp3 wreath domain (aa 33 - 317)
- Suppl_File_MAFAP1_Cterm_model.cif: AlphaFold3 model for the C. prolifera MAFAP1 C-terminal domain, region 1 and 2
- Suppl_File_AFInteracting_hmm.hmm: HMM sequence profile of AF-interacting region of C. prolifera proteins
- XXX_Foldseek.zip: Foldseek raw search results, separated by target databases (Swissprot, AFDB, CATH50)
Files
MAFAP1_region_1_Ig_Foldseek.zip
Files
(27.6 MB)
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Additional details
Related works
- Is supplement to
- Preprint: 10.1101/2024.04.19.590289 (DOI)
Funding
- U.S. National Science Foundation
- Towards an integrative model of cell adhesion and self-recognition in sponge (Porifera) tissues 2015608