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Published September 22, 2024 | Version v1
Dataset Open

Supplementary tables for publication "A reference-free algorithm discovers regulation in the plant transcriptome"

Authors/Creators

  • 1. ROR icon Stanford University School of Medicine
  • 2. ROR icon Stanford University
  • 3. ROR icon Silesian University of Technology
  • 4. ROR icon Carnegie Institution for Science

Description

Supplementary tables for publication "A reference-free algorithm discovers regulation in the plant transcriptome" (doi: https://doi.org/10.1101/2024.05.23.595613)

Table 1: complete list of significant anchors and associated genes from analysis of sorghum dataset

Table 2: complete list of significant anchors and associated genes from analysis of maize dataset

Table 3: complete list of significant anchors and associated genes from analysis of Arabidopsis P/Fe dataset

Table 4: complete list of significant anchors and associated genes from analysis of Arabidopsis FLOE1 dataset

Files

SuppTableA_sorghum_summary_anchors_genes_only.tsv.zip

Files (115.6 MB)

Additional details

Related works

Documents
Preprint: 10.1101/2024.05.23.595613 (DOI)

Software

Repository URL
https://github.com/refresh-bio/SPLASH/tree/archive/1.9.0
Programming language
C++ , Jupyter Notebook , Python , R , Makefile , Dockerfile